医学 AI

How Life Works: Darwinian Evolution of Proteins

J. C. Phillips

专题命中 生物医学文本 ：biomedical(abstract)；分类 q-bio

Comments 93 pages, 37 figures. This is a review article that highlights the main ideas from arXiv:1610.04116

Mechanical models of pattern and form in biological tissues: the role of stress-strain constitutive equations

Chiara Villa, Mark A. J. Chaplain, Alf Gerisch, Tommaso Lorenzi

专题命中 生物医学文本 ：biomedical(abstract)；分类 q-bio

Comments 33 pages + 6 pages of supplementary material, 15 figures, 6 movies

Using the structural kinome to systematize kinase drug discovery

Zheng Zhao, Philip E. Bourne

专题命中 生物医学文本 ：biomedical(abstract)；分类 q-bio

Comments 22 pages, 2 figures, 3 tables

A field guide to cultivating computational biology

Anne E Carpenter, Casey S Greene, Piero Carnici, Benilton S Carvalho, Michiel de Hoon, Stacey Finley, Kim-Anh Le Cao, Jerry SH Lee, Luigi Marchionni, Suzanne Sindi, Fabian J Theis, Gregory P Way, Jean YH Yang, Elana J Fertig

专题命中 生物医学文本 ：biomedical(abstract)；分类 q-bio

Comparing multiple networks using the Co-expression Differential Network Analysis (CoDiNA)

Deisy Morselli Gysi, Tiago Miranda Fragoso, Volker Buskamp, Eivind Almaas, Katja Nowick

专题命中 生物医学文本 ：biomedical(abstract)；分类 q-bio

Filtering ASVs/OTUs via Mutual Information-Based Microbiome Network Analysis

Elham Bayat Mokhtari, Benjamin Ridenhour

专题命中 生物医学文本 ：biomedical(abstract)；分类 q-bio

DI2: prior-free and multi-item discretization ofbiomedical data and its applications

Leonardo Alexandre, Rafael S. Costa, Rui Henriques

专题命中 生物医学文本 ：biomedical(abstract)；分类 q-bio

Intercellular communication induces glycolytic synchronization waves between individually oscillating cells

Martin Mojica-Benavides, David D. van Niekerk, Mite Mijalkov, Jacky L. Snoep, Bernhard Mehlig, Giovanni Volpe, Mattias Goksör, Caroline B. Adiels

专题命中 生物医学文本 ：biomedical(abstract)；分类 q-bio

Comments 10 pages, 5 figures

Journal ref PNAS 118 (2021) e2010075118

pdfPapers: shell-script utilities for frequency-based multi-word phrase extraction from PDF documents

Pavel Loskot

专题命中 生物医学文本 ：biomedical(abstract)；分类 q-bio

Comments 23 pages, 4 figures, 10 tables

External Electromagnetic Wave Excitation of a PreSynaptic Neuron Based on LIF model

Emad Arasteh Emamzadeh-Hashemi, Ailar Mahdizadeh

专题命中 生物医学文本 ：biomedical(abstract)；分类 q-bio

Comments 5pages,4figures,etech2020

The MAPT gene is differentially methylated in the progressive supranuclear palsy brain

Vincent Huin, Vincent Deramecourt, Dominique Caparros-Lefebvre, Claude-Alain Maurage, Charles Duyckaerts, Eniko Kovari, Florence Pasquier, Valérie Buée-Scherrer, Julien Labreuche, Hélène Behal, Luc Buée, Claire-Marie Dhaenens, Bernard Sablonnière

专题命中 生物医学文本 ：pathology(abstract)；分类 q-bio

Journal ref Movement Disorders, Wiley, 2016, 31 (12), pp.1883-1890

Homozygous GRN mutations: unexpected phenotypes and new insights into pathological and molecular mechanisms

Vincent Huin, Mathieu Barbier, Armand Bottani, Johannes Lobrinus, Fabienne Clot, Foudil Lamari, Laureen Chat, Benoît Rucheton, Frédérique Fluchère, Stéphane Auvin, Peter Myers, Antoinette Gelot, Agnès Camuzat, Catherine Caillaud, Ludmila Jornéa, Sylvie Forlani, Dario Saracino, Charles Duyckaerts, Alexis Brice, Alexandra Durr, Isabelle Le Ber

专题命中 生物医学文本 ：diagnosis(abstract)；分类 q-bio

Journal ref Brain - A Journal of Neurology , Oxford University Press (OUP), 2020, 143 (1), pp.303-319

PubSqueezer: A Text-Mining Web Tool to Transform Unstructured Documents into Structured Data

Alberto Calderone

专题命中 生物医学文本 ：biomedical(abstract)；分类 q-bio

Progress towards 3D-printing diamond for medical implants: A review

Aaqil Rifai, Shadi Houshyar, Kate Fox

专题命中 生物医学文本 ：biomedical(abstract)；分类 q-bio

Influence of proteins from physiological solutions on the electrochemical behaviour of the Ti-6Al-4V alloy: reproducibility and time-frequency dependence. ---- Influence de la teneur en protéines de solutions physiologiques sur le comportement électrochimique du Ti-6Al-4V : reproductibilité et représentation temps-fréquence

Jean Geringer, Laurent Navarro, Bernard Forest

专题命中 生物医学文本 ：biomedical(abstract)；分类 q-bio

Journal ref Matériaux & Techniques 98, 1 (2010) 59-68

Continuous Health Interface Event Retrieval

Vaibhav Pandey, Nitish Nag, Ramesh Jain

专题命中 生物医学文本 ：biomedical(abstract)；分类 q-bio

Comments ACM International Conference on Multimedia Retrieval 2020 (ICMR 2020), held in Dublin, Ireland from June 8-11, 2020

Journal ref ICMR 2020: Proceedings of the 2020 International Conference on Multimedia Retrieval, June 2020, Pages 486-494

Single-cell protein analysis by mass-spectrometry

Nikolai Slavov

专题命中 生物医学文本 ：pathology(abstract)；分类 q-bio

Comments keywords: single-cell analysis; single-cell proteomics; mass-spectrometry; isobaric carrier; sample preparation; systems biology

Journal ref Current Opinion in Chemical Biology (2020)

Computational Drug Repositioning and Elucidation of Mechanism of Action of Compounds against SARS-CoV-2

Francesco Napolitano, Gennaro Gambardella, Diego Carrella, Xin Gao, Diego di Bernardo

专题命中 生物医学文本 ：biomedical(abstract)；分类 q-bio

Unveiling new disease, pathway, and gene associations via multi-scale neural networks

Thomas Gaudelet, Noel Malod-Dognin, Jon Sanchez-Valle, Vera Pancaldi, Alfonso Valencia, Natasa Przulj

专题命中 生物医学文本 ：diagnosis(abstract)；分类 q-bio

Comments 16 pages

Journal ref PLOS ONE, 15(4), p.e0231059 (2020)

A hybrid P3HT-Graphene interface for efficient photostimulation of neurons

Mattia L. DiFrancesco, Elisabetta Colombo, Ermanno D. Papaleo, José Fernando Maya-Vetencourt, Giovanni Manfredi, Guglielmo Lanzani, Fabio Benfenati

专题命中 生物医学文本 ：biomedical(abstract)；分类 q-bio

Comments 10 pages, 5 figures

An integrated in vitro in silico approach for silver nanoparticle dosimetry in cell cultures

Daniele Poli1, Giorgio Mattei, Nadia Ucciferri, Arti Ahluwalia

专题命中 生物医学文本 ：biomedical(abstract)；分类 q-bio

Comments 20 pages, including Supplementary Materials

A guided network propagation approach to identify disease genes that combines prior and new information

Borislav H. Hristov, Bernard Chazelle, Mona Singh

专题命中 生物医学文本 ：biomedical(abstract)；分类 q-bio

Comments RECOMB2020

Cross-sectional focusing of red blood cells in a constricted microfluidic channel

Asena Abay, Steffen M. Recktenwald, Thomas John, Lars Kaestner, Christian Wagner

专题命中 生物医学文本 ：biomedical(abstract)；分类 q-bio

Comments accepted for soft matter

Nonautonomous Dynamics of Acute Cell Injury

Donald J. DeGracia, Doaa Taha, Fika Tri Anggraini, Zhi-Feng Huang

专题命中 生物医学文本 ：biomedical(abstract)；分类 q-bio

Comments 27 pages, 8 figures; Phys. Rev. E, in press

Journal ref Phys. Rev. E 100, 052407 (2019)

Visualizing biomolecular electrostatics in virtual reality with UnityMol-APBS

Joseph Laureanti, Juan Brandi, Elvis Offor, David Engel, Robert Rallo, Bojana Ginovska, Xavier Martinez, Marc Baaden, Nathan A. Baker

专题命中 生物医学文本 ：biomedical(abstract)；分类 q-bio

Journal ref Protein Science, 2019

Combining human cell line transcriptome analysis and Bayesian inference to build trustworthy machine learning models for prediction of animal toxicity in drug development

Laura-Jayne Gardiner, Anna Paola Carrieri, Jenny Wilshaw, Stephen Checkley, Edward O Pyzer-Knapp, Ritesh Krishna

专题命中 生物医学文本 ：biomedical(abstract)；分类 q-bio

Comments Machine Learning for Health (ML4H) at NeurIPS 2019 - Extended Abstract

INtERAcT: Interaction Network Inference from Vector Representations of Words

Matteo Manica, Roland Mathis, María Rodríguez Martínez

专题命中 生物医学文本 ：biomedical(abstract)；分类 q-bio

Journal ref Nature Machine Intelligence (2019)

Tasks, Techniques, and Tools for Genomic Data Visualization

Sabrina Nusrat, Theresa Harbig, Nils Gehlenborg

专题命中 生物医学文本 ：biomedical(abstract)；分类 q-bio

Comments 25 pages, 21 figures, 6 tables

Mapping the Human Body at Cellular Resolution -- The NIH Common Fund Human BioMolecular Atlas Program

Michael P Snyder, Shin Lin, Amanda Posgai, Mark Atkinson, Aviv Regev, Jennifer Rood, Orit Rosen, Leslie Gaffney, Anna Hupalowska, Rahul Satija, Nils Gehlenborg, Jay Shendure, Julia Laskin, Pehr Harbury, Nicholas A Nystrom, Ziv Bar-Joseph, Kun Zhang, Katy Börner, Yiing Lin, Richard Conroy, Dena Procaccini, Ananda L Roy, Ajay Pillai, Marishka Brown, Zorina S Galis

专题命中 生物医学文本 ：biomedical(abstract)；分类 q-bio

Comments 20 pages, 3 figures

POSITION PAPER: Credibility of In Silico Trial Technologies: A Theoretical Framing

Marco Viceconti, Miguel A. Juárez, Cristina Curreli, Marzio Pennisi, Giulia Russo, Francesco Pappalardo

专题命中 生物医学文本 ：biomedical(abstract)；分类 q-bio

Comments 11 pages