医学 AI - arXivDaily 专题

2506.00708 2025-11-11 cs.AI cs.CL cs.LG 79%

DrKGC: Dynamic Subgraph Retrieval-Augmented LLMs for Knowledge Graph Completion across General and Biomedical Domains

Yongkang Xiao, Sinian Zhang, Yi Dai, Huixue Zhou, Jue Hou, Jie Ding, Rui Zhang

机构 * University of Minnesota（明尼苏达大学）； University of Michigan（密歇根大学）

专题命中生物医学文本：biomedical(title,abstract)；分类 cs.LG

Comments Accepted at EMNLP 2025 Findings

2511.04790 2025-11-10 cs.LG cs.AI stat.ML 79%

Causal Structure and Representation Learning with Biomedical Applications

Caroline Uhler, Jiaqi Zhang

机构 * Department of Electrical Engineering and Computer Science, Massachusetts Institute of Technology（电气工程与计算机科学系，麻省理工学院）

专题命中生物医学文本：biomedical(title,abstract)；分类 cs.LG

Comments This article has successfully completed peer review and will appear in the Proceedings of the International Congress of Mathematicians 2026. Both authors contributed equally to this work

2511.03645 2025-11-06 cs.CV 79%

Signal Intensity-weighted coordinate channels improve learning stability and generalisation in 1D and 2D CNNs in localisation tasks on biomedical signals

Vittal L. Rao

机构 * Department of Medical Sciences and Technology（医学科学与技术系）； Indian Institute of Technology Madras（印度理工学院马德拉斯）

专题命中生物医学文本：biomedical(title,abstract)；分类 cs.CV

2510.25087 2025-10-30 cs.CL cs.LG 79%

BioCoref: Benchmarking Biomedical Coreference Resolution with LLMs

Nourah M Salem, Elizabeth White, Michael Bada, Lawrence Hunter

机构 * Computational Bioscience Program University of Colorado Anschutz Medical Campus（科学生物学程序，科罗拉多大学安舒茨医学校区）； Department of Pediatrics University of Chicago（儿科学系，芝加哥大学）

专题命中生物医学文本：biomedical(title,abstract)；分类 cs.LG

2510.25055 2025-10-30 cs.CL cs.AI cs.LG 79%

GAPMAP: Mapping Scientific Knowledge Gaps in Biomedical Literature Using Large Language Models

Nourah M Salem, Elizabeth White, Michael Bada, Lawrence Hunter

机构 * University of Colorado, Anschutz（科罗拉多大学安舒茨分校）； University of Chicago（芝加哥大学）

专题命中生物医学文本：biomedical(title,abstract)；分类 cs.LG

2510.21820 2025-10-28 cs.LG cs.AI 79%

Unlocking Biomedical Insights: Hierarchical Attention Networks for High-Dimensional Data Interpretation

Rekha R Nair, Tina Babu, Alavikunhu Panthakkan, Hussain Al-Ahmad, Balamurugan Balusamy

机构 * Department of Computer Science and Engineering, Alliance University（计算机科学与工程系，联盟大学）； College of Engineering and IT, University of Dubai（工程与信息技术学院，迪拜大学）； Shiv Nadar University（施瓦纳达大学）

专题命中生物医学文本：biomedical(title,abstract)；分类 cs.LG

2409.13342 2025-10-20 stat.ML cs.LG 79%

Validity of Feature Importance in Low-Performing Machine Learning for Tabular Biomedical Data

Youngro Lee, Giacomo Baruzzo, Jeonghwan Kim, Jongmo Seo, Barbara Di Camillo

机构 * Seoul National University（首尔国立大学）； University of Padova（帕多瓦大学）； Georgia Institute of Technology（佐治亚理工学院）

专题命中生物医学文本：biomedical(title,abstract)；分类 cs.LG

Journal ref IEEE Access (Early Access), 2025

2404.04067 2025-10-14 cs.CL cs.AI cs.LG 79%

Does Biomedical Training Lead to Better Medical Performance?

Amin Dada, Marie Bauer, Amanda Butler Contreras, Osman Alperen Koraş, Constantin Marc Seibold, Kaleb E Smith, Jens Kleesiek

机构 * Institute for AI in Medicine, University Hospital Essen（人工智能医学研究所，埃森大学医院）； Microsoft Healthcare & Life Sciences（微软医疗与生命科学）； NVIDIA（NVIDIA公司）； Cancer Research Center Cologne Essen (CCCE)（科隆埃森癌症研究中心（CCCE））； German Cancer Consortium (DKTK, Partner site Essen)（德国癌症联盟（DKTK，埃森分部））； Department of Physics of TU Dortmund（多特蒙德技术大学物理系）

专题命中生物医学文本：biomedical(title,abstract)；分类 cs.LG

Comments Proceedings of the Fourth Workshop on Generation, Evaluation and Metrics (GEM)

2506.04405 2025-10-07 cs.CL cs.AI cs.LG 79%

MedAgentGym: A Scalable Agentic Training Environment for Code-Centric Reasoning in Biomedical Data Science

Ran Xu, Yuchen Zhuang, Yishan Zhong, Yue Yu, Zifeng Wang, Xiangru Tang, Hang Wu, May D. Wang, Peifeng Ruan, Donghan Yang, Tao Wang, Guanghua Xiao, Xin Liu, Carl Yang, Yang Xie, Wenqi Shi

专题命中生物医学文本：biomedical(title,abstract)；分类 cs.LG

2509.18843 2025-09-24 cs.CL cs.IR cs.LG 79%

Are Smaller Open-Weight LLMs Closing the Gap to Proprietary Models for Biomedical Question Answering?

Damian Stachura, Joanna Konieczna, Artur Nowak

机构 * Evidence Prime

专题命中生物医学文本：biomedical(title,abstract)；分类 cs.LG

Comments CLEF 2025 Working Notes, 9-12 September 2025, Madrid, Spain

2507.13742 2025-09-23 cs.LG cs.AI math.OC 79%

Search-Optimized Quantization in Biomedical Ontology Alignment

Oussama Bouaggad, Natalia Grabar

专题命中生物医学文本：biomedical(title,abstract)；分类 cs.LG

Comments Accepted for publication in Frontiers in Artificial Intelligence - Medicine and Public Health (Original Research)

Journal ref Front. Artif. Intell. 8:1662984 (2025)

2509.10489 2025-09-16 eess.SP cs.SY eess.SY 79%

Development of AI-integrated infrastructure with biomedical device and mobile app for neonatal vital monitoring during and in between kangaroo care sessions

Saptarshi Purkayastha, Hrishikesh Bhagwat, Keerthika Sunchu, Orlando Hoilett, Eddy Odari, Reuben Thuo, Martin Wafula, Celia Kariuki, Sherri Bucher

专题命中生物医学文本：biomedical(title,abstract)；分类 eess.SP

Comments Presented at EMBC 2025, July 14-17, 2025

2509.07905 2025-09-10 cs.LG 79%

Bio-KGvec2go: Serving up-to-date Dynamic Biomedical Knowledge Graph Embeddings

Hamid Ahmad, Heiko Paulheim, Rita T. Sousa

机构 * University of Mannheim, Mannheim, Germany（曼海姆大学）； Data and Web Science Group, University of Mannheim, Mannheim, Germany（数据与网络科学组，曼海姆大学）

专题命中生物医学文本：biomedical(title,abstract)；分类 cs.LG

Comments Accepted at ISWC Poster and Demo Track 2025

2311.01301 2025-08-19 cs.LG cs.AI stat.ME 79%

TRIALSCOPE: A Unifying Causal Framework for Scaling Real-World Evidence Generation with Biomedical Language Models

Javier González, Risa Ueno, Cliff Wong, Zelalem Gero, Jass Bagga, Isabel Chien, Eduard Oravkin, Emre Kiciman, Aditya Nori, Roshanthi Weerasinghe, Rom S. Leidner, Brian Piening, Tristan Naumann, Carlo Bifulco, Hoifung Poon

机构 * Microsoft（微软公司）； University of Cambridge（剑桥大学）； University of Oxford（牛津大学）； Providence Genomics（普罗维登斯基因组学）

专题命中生物医学文本：biomedical(title,abstract)；分类 cs.LG

Comments 4 figures, 1 table

2508.11784 2025-08-19 cs.IR cs.LG 79%

Ontology-Guided Query Expansion for Biomedical Document Retrieval using Large Language Models

Zabir Al Nazi, Vagelis Hristidis, Aaron Lawson McLean, Jannat Ara Meem, Md Taukir Azam Chowdhury

机构 * University of California Riverside（加州大学河滨分校）； Friedrich Schiller University Jena（施莱尔大学耶拿分校）

专题命中生物医学文本：biomedical(title,abstract)；分类 cs.LG

2508.08602 2025-08-13 eess.SP 79%

Biomedical Signal Processing: EEG and ECG Classification with Discrete Wavelet Transforms, Energy Distribution, and Convolutional Neural Networks

Justin London

专题命中生物医学文本：biomedical(title,abstract)；分类 eess.SP

2507.08013 2025-07-28 cs.CL cs.AI cs.LG 79%

MedicalBERT: enhancing biomedical natural language processing using pretrained BERT-based model

K. Sahit Reddy, N. Ragavenderan, Vasanth K., Ganesh N. Naik, Vishalakshi Prabhu, Nagaraja G. S

专题命中生物医学文本：biomedical(title,abstract)；分类 cs.LG

Journal ref IAES Int J Artif Intell 14 (2025) 2367-2378

2507.05577 2025-07-09 cs.IR cs.CL cs.LG 79%

Beyond Retrieval: Ensembling Cross-Encoders and GPT Rerankers with LLMs for Biomedical QA

Shashank Verma, Fengyi Jiang, Xiangning Xue

机构 * Georgia Institute of Technology（佐治亚理工学院）

专题命中生物医学文本：biomedical(title,abstract)；分类 cs.LG

Comments Paper submitted to CLEF 2025 CEUR-WS

2507.02975 2025-07-08 cs.LG cs.IR 79%

Introducing Answered with Evidence -- a framework for evaluating whether LLM responses to biomedical questions are founded in evidence

Julian D Baldwin, Christina Dinh, Arjun Mukerji, Neil Sanghavi, Saurabh Gombar

专题命中生物医学文本：biomedical(title,abstract)；分类 cs.LG

Comments 17 pages; 3 figures; 3 main tables. This work will be submitted for full publication shortly;wanted to share ahead of industry conference

2501.01644 2025-07-01 cs.CL cs.LG 79%

Multimodal Contrastive Representation Learning in Augmented Biomedical Knowledge Graphs

Tien Dang, Viet Thanh Duy Nguyen, Minh Tuan Le, Truong-Son Hy

机构 * University of Alabama at Birmingham（阿拉巴马大学伯明翰分校）； Washington University in St. Louis（华盛顿大学圣路易斯分校）

专题命中生物医学文本：biomedical(title,abstract)；分类 cs.LG

2407.11034 2025-06-17 cs.LG 79%

Bridging Data Gaps in Healthcare: A Scoping Review of Transfer Learning in Biomedical Data Analysis

Siqi Li, Xin Li, Kunyu Yu, Di Miao, Mingcheng Zhu, Mengying Yan, Yuhe Ke, Danny D'Agostino, Yilin Ning, Qiming Wu, Ziwen Wang, Yuqing Shang, Molei Liu, Chuan Hong, Nan Liu

专题命中生物医学文本：biomedical(title,abstract)；分类 cs.LG

2408.12249 2025-05-20 cs.CL cs.AI cs.LG 79%

LLMs are not Zero-Shot Reasoners for Biomedical Information Extraction

Aishik Nagar, Viktor Schlegel, Thanh-Tung Nguyen, Hao Li, Yuping Wu, Kuluhan Binici, Stefan Winkler

机构 * ASUS Intelligent Cloud Services (AICS)（ASUS智能云服务）； Imperial College London（伦敦帝国学院）； University of Manchester（曼彻斯特大学）； National University of Singapore（新加坡国立大学）

专题命中生物医学文本：biomedical(title,abstract)；分类 cs.LG

Comments 15 pages

2505.10711 2025-05-19 cs.LG cs.AI 79%

GNN-Suite: a Graph Neural Network Benchmarking Framework for Biomedical Informatics

Sebestyén Kamp, Giovanni Stracquadanio, T. Ian Simpson

机构 * School of Informatics University of Edinburgh（信息学院爱丁堡大学）； School of Biological Sciences University of Edinburgh（生物科学学院爱丁堡大学）

专题命中生物医学文本：biomedical(title,abstract)；分类 cs.LG

Comments Main article 8 pages (20 in total with supplementary information included), 3 main article figures and 3 supplemental figures

2305.16326 2025-04-29 cs.CL cs.AI cs.IR cs.LG 79%

Benchmarking large language models for biomedical natural language processing applications and recommendations

Qingyu Chen, Yan Hu, Xueqing Peng, Qianqian Xie, Qiao Jin, Aidan Gilson, Maxwell B. Singer, Xuguang Ai, Po-Ting Lai, Zhizheng Wang, Vipina Kuttichi Keloth, Kalpana Raja, Jiming Huang, Huan He, Fongci Lin, Jingcheng Du, Rui Zhang, W. Jim Zheng, Ron A. Adelman, Zhiyong Lu, Hua Xu

专题命中生物医学文本：biomedical(title,abstract)；分类 cs.LG

Journal ref Nature Communications; 2025

2504.09582 2025-04-15 cs.AI cs.CL cs.LG 79%

Reduction of Supervision for Biomedical Knowledge Discovery

Christos Theodoropoulos, Andrei Catalin Coman, James Henderson, Marie-Francine Moens

专题命中生物医学文本：biomedical(title,abstract)；分类 cs.LG

Comments Published as part of the PhD dissertation: Theodoropoulos, Christos, Marie-Francine Moens, and Matthew Blaschko. "Deep Learning Models for the Extraction of Knowledge from Text." (2025)

2504.03964 2025-04-08 cs.CL cs.AI cs.LG 79%

Clinical ModernBERT: An efficient and long context encoder for biomedical text

Simon A. Lee, Anthony Wu, Jeffrey N. Chiang

专题命中生物医学文本：biomedical(title,abstract)；分类 cs.LG

Comments Manuscript writeup corresponding to the Clinical ModernBERT pre-trained encoder (https://huggingface.co/Simonlee711/Clinical_ModernBERT)

2504.01356 2025-04-03 cs.LG cs.SE 79%

xML-workFlow: an end-to-end explainable scikit-learn workflow for rapid biomedical experimentation

Khoa A. Tran, John V. Pearson, Nicola Waddell

专题命中生物医学文本：biomedical(title,abstract)；分类 cs.LG

Comments Technical Note, 8 pages, 1 figure

2503.22727 2025-04-03 cs.CL cs.LG 79%

A Large-Scale Vision-Language Dataset Derived from Open Scientific Literature to Advance Biomedical Generalist AI

Alejandro Lozano, Min Woo Sun, James Burgess, Jeffrey J. Nirschl, Christopher Polzak, Yuhui Zhang, Liangyu Chen, Jeffrey Gu, Ivan Lopez, Josiah Aklilu, Anita Rau, Austin Wolfgang Katzer, Collin Chiu, Orr Zohar, Xiaohan Wang, Alfred Seunghoon Song, Chiang Chia-Chun, Robert Tibshirani, Serena Yeung-Levy

专题命中生物医学文本：biomedical(title,abstract)；分类 cs.LG

2501.08766 2025-03-20 eess.SP 79%

A Systematic Method for Optimum Biomedical Wireless Power Transfer using Inductive Links in Area-Constrained Implants

Asif Iftekhar Omi, Anyu Jiang, Baibhab Chatterjee

专题命中生物医学文本：biomedical(title,abstract)；分类 eess.SP

2501.16533 2025-01-29 cs.CL cs.LG 79%

A comparison of data filtering techniques for English-Polish LLM-based machine translation in the biomedical domain

Jorge del Pozo Lérida, Kamil Kojs, János Máté, Mikołaj Antoni Barański, Christian Hardmeier

专题命中生物医学文本：biomedical(title,abstract)；分类 cs.LG

1. 生物医学文本 4499 篇

DrKGC: Dynamic Subgraph Retrieval-Augmented LLMs for Knowledge Graph Completion across General and Biomedical Domains

Causal Structure and Representation Learning with Biomedical Applications

Signal Intensity-weighted coordinate channels improve learning stability and generalisation in 1D and 2D CNNs in localisation tasks on biomedical signals

BioCoref: Benchmarking Biomedical Coreference Resolution with LLMs

GAPMAP: Mapping Scientific Knowledge Gaps in Biomedical Literature Using Large Language Models

Unlocking Biomedical Insights: Hierarchical Attention Networks for High-Dimensional Data Interpretation

Validity of Feature Importance in Low-Performing Machine Learning for Tabular Biomedical Data

Does Biomedical Training Lead to Better Medical Performance?

MedAgentGym: A Scalable Agentic Training Environment for Code-Centric Reasoning in Biomedical Data Science

Are Smaller Open-Weight LLMs Closing the Gap to Proprietary Models for Biomedical Question Answering?

Search-Optimized Quantization in Biomedical Ontology Alignment

Development of AI-integrated infrastructure with biomedical device and mobile app for neonatal vital monitoring during and in between kangaroo care sessions

Bio-KGvec2go: Serving up-to-date Dynamic Biomedical Knowledge Graph Embeddings

TRIALSCOPE: A Unifying Causal Framework for Scaling Real-World Evidence Generation with Biomedical Language Models

Ontology-Guided Query Expansion for Biomedical Document Retrieval using Large Language Models

Biomedical Signal Processing: EEG and ECG Classification with Discrete Wavelet Transforms, Energy Distribution, and Convolutional Neural Networks

MedicalBERT: enhancing biomedical natural language processing using pretrained BERT-based model

Beyond Retrieval: Ensembling Cross-Encoders and GPT Rerankers with LLMs for Biomedical QA

Introducing Answered with Evidence -- a framework for evaluating whether LLM responses to biomedical questions are founded in evidence

Multimodal Contrastive Representation Learning in Augmented Biomedical Knowledge Graphs

Bridging Data Gaps in Healthcare: A Scoping Review of Transfer Learning in Biomedical Data Analysis

LLMs are not Zero-Shot Reasoners for Biomedical Information Extraction

GNN-Suite: a Graph Neural Network Benchmarking Framework for Biomedical Informatics

Benchmarking large language models for biomedical natural language processing applications and recommendations

Reduction of Supervision for Biomedical Knowledge Discovery

Clinical ModernBERT: An efficient and long context encoder for biomedical text

xML-workFlow: an end-to-end explainable scikit-learn workflow for rapid biomedical experimentation

A Large-Scale Vision-Language Dataset Derived from Open Scientific Literature to Advance Biomedical Generalist AI

A Systematic Method for Optimum Biomedical Wireless Power Transfer using Inductive Links in Area-Constrained Implants

A comparison of data filtering techniques for English-Polish LLM-based machine translation in the biomedical domain