医学 AI

Integrating Complexity and Biological Realism: High-Performance Spiking Neural Networks for Breast Cancer Detection

Zofia Rudnicka, Januszcz Szczepanski, Agnieszka Pregowska

专题命中 病理影像 ：medical image(abstract)；分类 q-bio、eess.IV

Scalable Generation of Spatial Transcriptomics from Histology Images via Whole-Slide Flow Matching

Tinglin Huang, Tianyu Liu, Mehrtash Babadi, Wengong Jin, Rex Ying

专题命中 病理影像 ：pathology(abstract)；分类 cs.CV、q-bio

Comments Accepted at ICML 2025

An Inclusive Foundation Model for Generalizable Cytogenetics in Precision Oncology

Changchun Yang, Weiqian Dai, Yilan Zhang, Siyuan Chen, Jingdong Hu, Junkai Su, Yuxuan Chen, Ao Xu, Na Li, Xin Gao, Yongguo Yu

专题命中 病理影像 ：clinical AI(abstract)；分类 q-bio、eess.IV

Comments These authors contributed equally to this work: Changchun Yang, Weiqian Dai, Yilan Zhang

TransST: Transfer Learning Embedded Spatial Factor Modeling of Spatial Transcriptomics Data

Shuo Shuo Liu, Shikun Wang, Yuxuan Chen, Anil K. Rustgi, Ming Yuan, Jianhua Hu

专题命中 病理影像 ：biomedical(abstract)；分类 cs.LG、q-bio

Experts' cognition-driven safe noisy labels learning for precise segmentation of residual tumor in breast cancer

Yongquan Yang, Jie Chen, Yani Wei, Mohammad Alobaidi, Hong Bu

专题命中 病理影像 ：pathology(abstract)；分类 q-bio、eess.IV

Journal ref Journal of Data Science and Intelligent Systems, 2025

Immunocto: a massive immune cell database auto-generated for histopathology

Mikaël Simard, Zhuoyan Shen, Konstantin Bräutigam, Rasha Abu-Eid, Maria A. Hawkins, Charles-Antoine Collins-Fekete

专题命中 病理影像 ：pathology(abstract)；分类 q-bio、eess.IV

TSEML: A task-specific embedding-based method for few-shot classification of cancer molecular subtypes

Ran Su, Rui Shi, Hui Cui, Ping Xuan, Chengyan Fang, Xikang Feng, Qiangguo Jin

专题命中 病理影像 ：diagnosis(abstract)；分类 cs.LG、q-bio

Journal ref 2024 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)

A Pan-cancer Classification Model using Multi-view Feature Selection Method and Ensemble Classifier

Tareque Mohmud Chowdhury, Farzana Tabassum, Sabrina Islam, Abu Raihan Mostofa Kamal

专题命中 病理影像 ：diagnosis(abstract)；分类 cs.LG、q-bio

Comments 20 pages, 5 figures, 9 tables

DLSOM: A Deep learning-based strategy for liver cancer subtyping

Fabio Zamio

专题命中 病理影像 ：diagnosis(abstract)；分类 cs.LG、q-bio

Leveraging Transfer Learning and Multiple Instance Learning for HER2 Automatic Scoring of H\&E Whole Slide Images

Rawan S. Abdulsadig, Bryan M. Williams, Nikolay Burlutskiy

专题命中 病理影像 ：medical image(abstract)；分类 cs.CV、q-bio

Machine learning identification of maternal inflammatory response and histologic choroamnionitis from placental membrane whole slide images

Abhishek Sharma, Ramin Nateghi, Marina Ayad, Lee A. D. Cooper, Jeffery A. Goldstein

专题命中 病理影像 ：pathology(abstract)；分类 cs.CV、q-bio

A shortest-path based clustering algorithm for joint human-machine analysis of complex datasets

Diego Ulisse Pizzagalli, Santiago Fernandez Gonzalez, Rolf Krause

专题命中 病理影像 ：biomedical(abstract)；分类 cs.LG、q-bio

Heterogeneous graph attention network improves cancer multiomics integration

Sina Tabakhi, Charlotte Vandermeulen, Ian Sudbery, Haiping Lu

专题命中 病理影像 ：diagnosis(abstract)；分类 cs.LG、q-bio

Comments 29 pages, 13 figures

Deep-learning Assisted Detection and Quantification of (oo)cysts of Giardia and Cryptosporidium on Smartphone Microscopy Images

Suprim Nakarmi, Sanam Pudasaini, Safal Thapaliya, Pratima Upretee, Retina Shrestha, Basant Giri, Bhanu Bhakta Neupane, Bishesh Khanal

专题命中 病理影像 ：biomedical(comments,journal_ref)；分类 cs.CV、cs.LG、eess.IV

Comments 21 pages (including supplementary information), 5 figures, 7 tables, Accepted for publication at the Journal of Machine Learning for Biomedical Imaging (MELBA) https://melba-journal.org/2024:014

Journal ref Machine.Learning.for.Biomedical.Imaging. 2 (2024)

Cancer-inspired Genomics Mapper Model for the Generation of Synthetic DNA Sequences with Desired Genomics Signatures

Teddy Lazebnik, Liron Simon-Keren

专题命中 病理影像 ：diagnosis(abstract)；分类 cs.LG、q-bio

Quantifying Smooth Muscles Regional Organization in the Rat Bladder Using Immunohistochemistry, Multiphoton Microscopy and Machine Learning

Alireza Asadbeygi, Yasutaka Tobe, Naoki Yoshimura, Sean D. Stocker, Simon Watkins, Paul Watton, Anne M. Robertson

专题命中 病理影像 ：CT(abstract)；分类 q-bio、eess.IV

Primary liver cancer classification from routine tumour biopsy using weakly supervised deep learning

Aurélie Beaufrère, Nora Ouzir, Paul Emile Zafar, Astrid Laurent-Bellue, Miguel Albuquerque, Gwladys Lubuela, Jules Grégory, Catherine Guettier, Kévin Mondet, Jean-Christophe Pesquet, Valérie Paradis

专题命中 病理影像 ：diagnosis(abstract)；分类 cs.CV、q-bio

Comments https://www.sciencedirect.com/science/article/pii/S2589555924000090

Journal ref JHEP Reports, Volume 6, Issue 3, 2024

Hitchhiker's guide to cancer-associated lymphoid aggregates in histology images: manual and deep learning-based quantification approaches

Karina Silina, Francesco Ciompi

专题命中 病理影像 ：pathology(abstract)；分类 cs.CV、q-bio

Comments 14 pages, 3 figures, 1 table, 3 boxes, protocol/guideline

AI-Enabled Lung Cancer Prognosis

Mahtab Darvish, Ryan Trask, Patrick Tallon, Mélina Khansari, Lei Ren, Michelle Hershman, Bardia Yousefi

专题命中 病理影像 ：diagnosis(abstract)；分类 q-bio、eess.IV

Comments This is the author's version of a book chapter entitled: "Cancer Research: An Interdisciplinary Approach", Springer

Journal ref Springer book chapter "Cancer Research: An Interdisciplinary Approach" 2024

Ruhr Hand Motion Catalog of Human Center-Out Transport Trajectories in 3D Task-Space Captured by a Redundant Measurement System

Tim Sziburis, Susanne Blex, Tobias Glasmachers, Ioannis Iossifidis

专题命中 病理影像 ：pathology(abstract)；分类 q-bio、eess.SP

MUSTANG: Multi-Stain Self-Attention Graph Multiple Instance Learning Pipeline for Histopathology Whole Slide Images

Amaya Gallagher-Syed, Luca Rossi, Felice Rivellese, Costantino Pitzalis, Myles Lewis, Michael Barnes, Gregory Slabaugh

专题命中 病理影像 ：diagnosis(abstract)；分类 cs.CV、q-bio

Comments Accepted for publication at BMVC 2023

High-content stimulated Raman histology of human breast cancer

Hongli Ni, Chinmayee Prabhu Dessai, Haonan Lin, Wei Wang, Shaoxiong Chen, Yuhao Yuan, Xiaowei Ge, Jianpeng Ao, Nolan Vild, Ji-Xin Cheng

专题命中 病理影像 ：diagnosis(abstract)；分类 q-bio、eess.IV

Comments 6 figures

Leveraging mid-infrared spectroscopic imaging and deep learning for tissue subtype classification in ovarian cancer

Chalapathi Charan Gajjela, Matthew Brun, Rupali Mankar, Sara Corvigno, Noah Kennedy, Yanping Zhong, Jinsong Liu, Anil K. Sood, David Mayerich, Sebastian Berisha, Rohith Reddy

专题命中 病理影像 ：diagnosis(abstract)；分类 q-bio、eess.IV

Deep Weakly-Supervised Learning Methods for Classification and Localization in Histology Images: A Survey

Jérôme Rony, Soufiane Belharbi, Jose Dolz, Ismail Ben Ayed, Luke McCaffrey, Eric Granger

专题命中 病理影像 ：biomedical(comments,journal_ref)；分类 cs.CV、cs.LG、eess.IV

Comments Accepted for publication at the Journal of Machine Learning for Biomedical Imaging (MELBA) https://melba-journal.org/2023:004

Journal ref Machine.Learning.for.Biomedical.Imaging. 2 (2023)

Solitary pulmonary nodules prediction for lung cancer patients using nomogram and machine learning

Hailan Zhang, Gongjin Song

专题命中 病理影像 ：CT(abstract)；分类 q-bio、eess.IV

Explainable AI for Bioinformatics: Methods, Tools, and Applications

Md. Rezaul Karim, Tanhim Islam, Oya Beyan, Christoph Lange, Michael Cochez, Dietrich Rebholz-Schuhmann, Stefan Decker

专题命中 病理影像 ：biomedical(abstract)；分类 cs.LG、q-bio

A systematic review of biologically-informed deep learning models for cancer: fundamental trends for encoding and interpreting oncology data

Magdalena Wysocka, Oskar Wysocki, Marie Zufferey, Dónal Landers, André Freitas

专题命中 病理影像 ：biomedical(abstract)；分类 cs.LG、q-bio

Comments 25 pages, 5 figures

Imaging-based representation and stratification of intra-tumor Heterogeneity via tree-edit distance

Lara Cavinato, Matteo Pegoraro, Alessandra Ragni, Martina Sollini, Anna Paola Erba, Francesca Ieva

专题命中 病理影像 ：CT(abstract)；分类 q-bio、eess.IV

Predicting Survival of Tongue Cancer Patients by Machine Learning Models

Angelos Vasilopoulos, Nan Miles Xi

专题命中 病理影像 ：diagnosis(abstract)；分类 cs.LG、q-bio

Predicting Brain Age using Transferable coVariance Neural Networks

Saurabh Sihag, Gonzalo Mateos, Corey McMillan, Alejandro Ribeiro

专题命中 病理影像 ：pathology(abstract)；分类 cs.LG、q-bio