Atlas H&E-TME: Scalable AI-Based Tissue Profiling at Expert Pathologist-Level Accuracy
Atlas H&E-TME:基于AI的可扩展组织分析,达到专家病理学家级别的准确性
Kai Standvoss, Miriam Hägele, Rosemarie Krupar, Julika Ribbat-Idel, Jennifer Altschüler, Gerrit Erdmann, Hans Pinckaers, Evelyn Ramberger, Madleen Drinkwitz, Ádám Nárai, Alexander Möllers, Katja Lingelbach, Sebastian Kons, Lukas Hönig, Recepcan Adigüzel, Joana Baião, Alberto Megina Gonzalo, Marius Teodorescu, Marie-Lisa Eich, Paolo Chetta, Shakil Merchant, Verena Aumiller, Simon Schallenberg, Andrew Norgan, Klaus-Robert Müller, Lukas Ruff, Maximilian Alber, Frederick Klauschen
机构
*
Aignostics, Germany(Aignostics,德国)
;
Institute of Pathology, Charité – Universitätsmedizin Berlin, Germany(柏林夏里特医学院病理学研究所)
;
Berlin Institute of Health, Charité – Universitätsmedizin Berlin, Germany(柏林夏里特医学院柏林健康研究所)
;
Massachusetts General Hospital, Department of Pathology, Harvard Medical School, Boston, MA, US(哈佛医学院麻省总医院病理学系)
;
Department of Laboratory Medicine and Pathology, Mayo Clinic, Rochester, MN, US(梅奥诊所检验医学与病理学系)
;
Machine Learning Group, Technische Universität Berlin, Germany(柏林工业大学机器学习组)
;
BIFOLD – Berlin Institute for the Foundations of Learning and Data, Germany(柏林学习与数据基础研究所)
;
Department of Artificial Intelligence, Korea University, Republic of Korea(高丽大学人工智能系)
;
Max-Planck Institute for Informatics, Germany(马克斯·普朗克信息学研究所)
;
German Cancer Research Center (DKFZ) & German Cancer Consortium (DKTK), Berlin & Munich Partner Sites, Germany(德国癌症研究中心及德国癌症联盟柏林和慕尼黑合作站点)
;
Institute of Pathology, Ludwig-Maximilians-Universität München, Germany(慕尼黑大学病理学研究所)
;
Bavarian Cancer Research Center (BZKF), Germany(巴伐利亚癌症研究中心)
Slide-Level Active Learning Reduces Annotation Burden in H&E images
滑动级主动学习减轻苏木精-伊红染色图像的标注负担
Mahsa Vali, Zhilong Weng, Noémie Moreaua, Yuri Tolkach, Katarzyna Bozek
机构
*
Institute for Biomedical Informatics, Faculty of Medicine(生物医学信息学研究所,医学学院)
;
University Hospital Cologne, University of Cologne(科隆大学医院,科隆大学)
;
Center for Molecular Medicine Cologne (CMMC), Faculty of Medicine(科隆分子医学中心(CMMC),医学学院)
;
Cologne Excellence Cluster on Cellular Stress Responses in Aging-Associated Diseases (CECAD), University of Cologne(科隆卓越集群:与衰老相关疾病细胞应激反应(CECAD),科隆大学)
;
Faculty of Mathematics(数学学院)
;
Natural Sciences, University of Cologne(自然科学学院,科隆大学)
;
Institute of Pathology, University Hospital Cologne(病理学研究所,科隆大学医院)
Compass: Prostate Cancer Detection Needs Multi-View Context
Compass:前列腺癌检测需要多视图上下文
Paul F. R. Wilson, Mohamed Harmanani, Zhuoxin Guo, Obed K. Dzikunu, Hannes Cash, Adam Kinnaird, Brian Wodlinger, Purang Abolmaesumi, Parvin Mousavi
机构
*
Queen’s University(女王大学)
;
University of British Columbia(英属哥伦比亚大学)
;
Otto von Guericke University Magdeburg(马格德堡奥托·冯·格里克大学)
;
University of Alberta(阿尔伯塔大学)
;
Exact Imaging(精准成像公司)
;
Vector Institute(向量研究所)
Alexander Möllers, Marvin Sextro, Julius Hense, Gabriel Dernbach, Klaus-Robert Müller
机构
*
Berlin Institute for the Foundations of Learning and Data(柏林学习与数据基础研究所)
;
Machine Learning Group, Technische Universität Berlin(柏林技术大学机器学习小组)
;
Aignostics
;
Institute of Pathology, Charité – Universitätsmedizin Berlin(柏林查理医院病理研究所)
;
Max-Planck Institute for Informatics(马克斯·普朗克信息研究所)
;
Department of Artificial Intelligence, Korea University(韩国大学人工智能系)
Graph Mamba Survival Analysis Based on Topology-Aware ordering
基于拓扑感知排序的图Mamba生存分析
Yuanfang Chen, Peiqiang Yan, Yuntao Shou, Qian Zhao, Xiangyong Cao
机构
*
School of Mathematics and Statistics(数学与统计学学院)
;
West China Science and Technology Innovation Harbor(西部科学与技术创新港)
;
School of Computer Science and Technology(计算机科学与技术学院)
A Multimodal 3D Foundation Model for Light Sheet Fluorescence Microscopy Enables Few-Shot Segmentation, Classification, and Deblurring
一种用于光片荧光显微镜的多模态3D基础模型实现少样本分割、分类和去模糊
Adina Scheinfeld, Haotan Zhang, Shang Mu, Rudolf L. M. van Herten, Lucas Stoffl, Ali Erturk, Zhuhao Wu, Johannes C. Paetzold
机构
*
Tri-Institutional Program in Computational Biology \& Medicine, Weill Cornell Medicine, New York, NY, USA Department of Radiology, Weill Cornell Medicine, New York, NY, USA Helen
;
Robert Appel Alzheimers Disease Research Institute, Feil Family Brain
;
Mind Research Institute, Weill Cornell Medicine, New York, NY, USA Graduate Program in Physiology, Biophysics
;
Systems Biology, Weill Cornell Medicine, New York, NY, USA Cornell Tech, New York, NY, USA Institute for Intelligent Biotechnologies (iBIO), Helmholtz Center Munich, Neuherberg, Germany Institute for Stroke
;
Dementia Research, Klinikum der Universität München, Ludwig-Maximilians University Munich, Munich, Germany
CommentsAccepted at the IEEE Engineering in Medicine and Biology Society Annual International Conference (Proceedings of the 48th International Conference), 2026
CytoSyn: a Foundation Diffusion Model for Histopathology -- Tech Report
CytoSyn:一种用于病理学的基准扩散模型——技术报告
Thomas Duboudin, Xavier Fontaine, Etienne Andrier, Lionel Guillou, Alexandre Filiot, Thalyssa Baiocco-Rodrigues, Antoine Olivier, Alberto Romagnoni, John Klein, Jean-Baptiste Schiratti
Beyond Attention Heatmaps: How to Get Better Explanations for Multiple Instance Learning Models in Histopathology
超越注意力热图:如何为多实例学习模型在病理学中的更好解释
Mina Jamshidi Idaji, Julius Hense, Tom Neuhäuser, Augustin Krause, Yanqing Luo, Oliver Eberle, Thomas Schnake, Laure Ciernik, Farnoush Rezaei Jafari, Reza Vahidimajd, Jonas Dippel, Christoph Walz, Frederick Klauschen, Andreas Mock, Klaus-Robert Müller
Disentangled Multi-modal Learning of Histology and Transcriptomics for Cancer Characterization
解耦的多模态学习:组织学与转录组学用于癌症表征
Yupei Zhang, Xiaofei Wang, Anran Liu, Lequan Yu, Chao Li
机构
*
Department of Clinical Neurosciences, University of Cambridge, UK(剑桥大学临床神经科学系)
;
Department of Health Technology & Informatics, The Hong Kong Polytechnic University(香港理工大学健康科技与信息学系)
;
Department of Statistics and Actuarial Science, The University of Hong Kong(香港大学统计与精算科学系)
;
Department of Clinical Neurosciences and Department of Applied Mathematics and Theoretical Physics, University of Cambridge(剑桥大学临床神经科学系和应用数学与理论物理系;邓迪大学科学与工程学院和医学院)
;
School of Science and Engineering and School of Medicine, University of Dundee, UK
Histopathology Image Normalization via Latent Manifold Compaction
通过潜在流形压缩的组织病理图像标准化
Xiaolong Zhang, Jianwei Zhang, Selim Sevim, Emek Demir, Ece Eksi, Xubo Song
机构
*
Knight Cancer Institute, Oregon Health and Science University(骑士癌症研究所,俄勒冈健康与科学大学)
;
Brenden-Colson Center for Pancreatic Care, Oregon Health and Science University(布雷登-科尔森胰腺护理中心,俄勒冈健康与科学大学)
GUIDE-US: Grade-Informed Unpaired Distillation of Encoder Knowledge from Histopathology to Micro-UltraSound
GUIDE-US: 基于等级的无配对编码器知识蒸馏从病理学至微超声
Emma Willis, Tarek Elghareb, Paul F. R. Wilson, Minh Nguyen Nhat To, Mohammad Mahdi Abootorabi, Amoon Jamzad, Brian Wodlinger, Parvin Mousavi, Purang Abolmaesumi
机构
*
University of British Columbia(不列颠哥伦比亚大学)
;
Queen’s University(皇后大学)
;
Exact Imaging
Augmented Intelligence for Multimodal Virtual Biopsy in Breast Cancer Using Generative Artificial Intelligence
增强智能用于乳腺癌多模态虚拟活检的生成式人工智能
Aurora Rofena, Claudia Lucia Piccolo, Bruno Beomonte Zobel, Paolo Soda, Valerio Guarrasi
机构
*
Department of Radiology, Fondazione Policlinico Campus Bio-Medico(放射学系,政策临床医学院)
;
Department of Radiology, Università Campus Bio-Medico di Roma(放射学系,罗马生物医学大学)
;
Department of Diagnostics and Intervention, Radiation Physics, Biomedical Engineering, Umeå University(诊断与介入系,辐射物理,生物医学工程,乌梅拉大学)
Decoding Future Risk: Deep Learning Analysis of Tubular Adenoma Whole-Slide Images
解码未来风险:深度学习在管状腺瘤全切片图像分析中的应用
Ahmed Rahu, Brian Shula, Brandon Combs, Aqsa Sultana, Surendra P. Singh, Vijayan K. Asari, Derrick Forchetti
机构
*
Dept. of Pathology(病理学系)
;
Honeywell International Inc.(霍尼韦尔国际公司)
;
South Bend Medical Foundation(南本德医疗基金会)
;
Dept. of Electrical and Computer Engineering(电气与计算机工程系)