医学 AI

Why is the winner the best?

Matthias Eisenmann, Annika Reinke, Vivienn Weru, Minu Dietlinde Tizabi, Fabian Isensee, Tim J. Adler, Sharib Ali, Vincent Andrearczyk, Marc Aubreville, Ujjwal Baid, Spyridon Bakas, Niranjan Balu, Sophia Bano, Jorge Bernal, Sebastian Bodenstedt, Alessandro Casella, Veronika Cheplygina, Marie Daum, Marleen de Bruijne, Adrien Depeursinge, Reuben Dorent, Jan Egger, David G. Ellis, Sandy Engelhardt, Melanie Ganz, Noha Ghatwary, Gabriel Girard, Patrick Godau, Anubha Gupta, Lasse Hansen, Kanako Harada, Mattias Heinrich, Nicholas Heller, Alessa Hering, Arnaud Huaulmé, Pierre Jannin, Ali Emre Kavur, Oldřich Kodym, Michal Kozubek, Jianning Li, Hongwei Li, Jun Ma, Carlos Martín-Isla, Bjoern Menze, Alison Noble, Valentin Oreiller, Nicolas Padoy, Sarthak Pati, Kelly Payette, Tim Rädsch, Jonathan Rafael-Patiño, Vivek Singh Bawa, Stefanie Speidel, Carole H. Sudre, Kimberlin van Wijnen, Martin Wagner, Donglai Wei, Amine Yamlahi, Moi Hoon Yap, Chun Yuan, Maximilian Zenk, Aneeq Zia, David Zimmerer, Dogu Baran Aydogan, Binod Bhattarai, Louise Bloch, Raphael Brüngel, Jihoon Cho, Chanyeol Choi, Qi Dou, Ivan Ezhov, Christoph M. Friedrich, Clifton Fuller, Rebati Raman Gaire, Adrian Galdran, Álvaro García Faura, Maria Grammatikopoulou, SeulGi Hong, Mostafa Jahanifar, Ikbeom Jang, Abdolrahim Kadkhodamohammadi, Inha Kang, Florian Kofler, Satoshi Kondo, Hugo Kuijf, Mingxing Li, Minh Huan Luu, Tomaž Martinčič, Pedro Morais, Mohamed A. Naser, Bruno Oliveira, David Owen, Subeen Pang, Jinah Park, Sung-Hong Park, Szymon Płotka, Elodie Puybareau, Nasir Rajpoot, Kanghyun Ryu, Numan Saeed, Adam Shephard, Pengcheng Shi, Dejan Štepec, Ronast Subedi, Guillaume Tochon, Helena R. Torres, Helene Urien, João L. Vilaça, Kareem Abdul Wahid, Haojie Wang, Jiacheng Wang, Liansheng Wang, Xiyue Wang, Benedikt Wiestler, Marek Wodzinski, Fangfang Xia, Juanying Xie, Zhiwei Xiong, Sen Yang, Yanwu Yang, Zixuan Zhao, Klaus Maier-Hein, Paul F. Jäger, Annette Kopp-Schneider, Lena Maier-Hein

专题命中 生物医学文本 ：medical image(abstract)；biomedical(abstract)；分类 cs.CV、cs.LG

Comments accepted to CVPR 2023

Artificial Intelligence-Based Methods for Fusion of Electronic Health Records and Imaging Data

Farida Mohsen, Hazrat Ali, Nady El Hajj, Zubair Shah

专题命中 生物医学文本 ：medical image(abstract)；diagnosis(abstract)；分类 cs.CV、cs.LG

Comments Accepted in Nature Scientific Reports. 20 pages

Journal ref Sci Rep 12, 17981 (2022)

A Formalism for Modelling Traction forces and Cell Shape Evolution during Cell Migration in Various Biomedical Processes

Qiyao Peng, Fred Vermolen, Daphne Weihs

专题命中 生物医学文本 ：biomedical(title)；分类 q-bio

SasCsvToolkit -- A versatile parallel 'bag-of-tasks' job submission application on heterogeneous and homogeneous platforms for Big Data Analytics such as for Biomedical Informatics

Abhishek Narain Singh

专题命中 生物医学文本 ：biomedical(title)；分类 q-bio

Potential for biomedical applications of Positron Annihilation Lifetime Spectroscopy (PALS)

Ewelina Kubicz

专题命中 生物医学文本 ：biomedical(title)；分类 q-bio

Comments 4 pages, Conference Proceeding of "18th International Conference on Positron Annihilation"

Multiparametric qualimetric microsurgical scanning chip-lancet model: theoretical metrological and biomedical considerations

Oleg V. Gradov, Arthur G. Jablokov

专题命中 生物医学文本 ：biomedical(title)；分类 q-bio

Journal ref MicroMedicine, 3(2):31-35, 2015

Supporting novel biomedical research via multilayer collaboration networks

Konstantin Kuzmin, Xiaoyan Lu, Partha Sarathi Mukherjee, Juntao Zhuang, Chris Gaiteri, Boleslaw K Szymanski

专题命中 生物医学文本 ：biomedical(title)；分类 q-bio

Journal ref Applied Network Science 1:11, 2016

SCARF: A Biomedical Association Rule Finding Webserver

Balazs Szalkai, Vince Grolmusz

专题命中 生物医学文本 ：biomedical(title)；分类 q-bio

Natural calcium carbonate for biomedical applications

Sonali S. Sali

专题命中 生物医学文本 ：biomedical(title)；分类 q-bio

Comments M.Tech (Biotechnology) Dissertation Thesis project

A Novel Matrix Representation of Discrete Biomedical Signals

Aditya Ramesh, Anagh Pathak, Kaushik Majumdar

专题命中 生物医学文本 ：biomedical(title)；分类 q-bio

Automatic annotation of bioinformatics workflows with biomedical ontologies

Beatriz García-Jiménez, Mark D. Wilkinson

专题命中 生物医学文本 ：biomedical(title)；分类 q-bio

Comments 6th International Symposium on Leveraging Applications (ISoLA 2014 conference), 15 pages, 4 figures

Biomolecular Filters for Improved Separation of Output Signals in Enzyme Logic Systems Applied to Biomedical Analysis

Jan Halamek, Jian Zhou, Lenka Halamkova, Vera Bocharova, Vladimir Privman, Joseph Wang, Evgeny Katz

专题命中 生物医学文本 ：biomedical(title)；分类 q-bio

Journal ref Analyt. Chem. 83, 8383-8386 (2011)

A modified porous titanium sheet prepared by plasma activated sintering for biomedical applications

Yukimichi Tamaki, Won Sik Lee, Yu Kataoka, Takashi Miyazaki

专题命中 生物医学文本 ：biomedical(title)；分类 q-bio

Comments 5 pages, 4 figures

Machine learning enabled multiple illumination quantitative optoacoustic imaging of blood oxygenation in humans

Thomas Kirchner, Michael Jaeger, Martin Frenz

专题命中 生物医学文本 ：biomedical(abstract,comments)；diagnosis(abstract)；分类 eess.IV

Comments submitted to Biomedical Optics Express

Deep Learning in Photoacoustic Tomography: Current approaches and future directions

Andreas Hauptmann, Ben Cox

专题命中 生物医学文本 ：biomedical(abstract,journal_ref)；分类 cs.CV、cs.LG、eess.IV

Journal ref J. of Biomedical Optics, 25(11), 112903 (2020)

An Optical Flow-Based Approach for Minimally-Divergent Velocimetry Data Interpolation

Berkay Kanberoglu, Dhritiman Das, Priya Nair, Pavan Turaga, David Frakes

专题命中 生物医学文本 ：biomedical(abstract,comments)；medical image(abstract)；分类 cs.CV

Comments 24 pages, 10 figures, International Journal of Biomedical Imaging, accepted manuscript

Deterministic Integrity Gates for LLM-Assisted Clinical Manuscript Preparation: An Auditable Biomedical Informatics Architecture

用于LLM辅助临床手稿准备的确定性完整性门控：一种可审计的生物医学信息学架构

Yoojin Nam, Jinhoon Jeong, Namkug Kim

机构 * University of Ulsan College of Medicine（蔚山大学医学院） ； Asan Medical Center（峨山医疗中心） ； Aperivue ； AMIST, Asan Medical Center（AMIST，峨山医疗中心） 纠错

专题命中 生物医学文本 ：biomedical(title)

AI总结 提出一种确定性完整性门控架构，通过将工作流分解为可独立验证的技能并在每个阶段设置确定性检查，解决了LLM生成临床手稿中的虚假引用、数据漂移和报告指南缺失问题。

Comments 28 pages, 3 figures, 4 tables; includes supplementary material (deterministic-detector inventory, per-class defect breakdown, worked example). Software (MIT): https://github.com/Aperivue/medsci-skills . Archived on Zenodo: concept DOI https://doi.org/10.5281/zenodo.20155321 and version DOI (v3.8.0) https://doi.org/10.5281/zenodo.20582972

Changing topic bias in biomedical science maps by linking documents through alternative data sources: policy documents, patents, authors, Facebook, and Twitter

通过链接文档的替代数据源改变生物医学科学地图中的主题偏见：政策文件、专利、作者、Facebook和Twitter

Juan Pablo Bascur, Rodrigo Costas, Suzan Verberne

专题命中 生物医学文本 ：biomedical(title)

AI总结 本文探讨通过不同数据源构建文档网络如何改变科学地图的主题偏见，发现不同数据源影响不同主题，为定制化科学地图提供可能。

Comments modifications from the second round of peer review in metaror, including changing the title

What Makes a Medical Checker Trainable? Diagnosing Signal Collapse and Reward Hacking in Checker-Guided RAG for Biomedical QA

什么使医学检查器可训练？诊断生物医学问答中检查器引导的RAG中的信号崩溃和奖励黑客

Yuelyu Ji, Min Gu Kwak, Hang Zhang, Xizhi Wu, Chenyu Li, Yanshan Wan

机构 * University of Pittsburgh（匹兹堡大学） 纠错

专题命中 生物医学文本 ：biomedical(title)

AI总结 本文通过比较四种NLI检查器作为GRPO训练的医学RAG代理的过程奖励，诊断了信号崩溃和奖励黑客现象，发现检查器的输出分布而非保留准确率决定了其是否提供可训练梯度，并提出了验证器作为奖励系统的边界条件。

Gold Bipyramids as a Promising Alternative to Gold Nanorods for Analytical and Biomedical Applications

五边形金双锥体作为分析和生物医学应用中优于金纳米棒的有希望的替代品

Andrey M. Burov, Sergey V. Zarkov, Arina V. Drozd, Igor V. Borisov, Elena G. Zavyalova, Nikolai G. Khlebtsov

专题命中 生物医学文本 ：biomedical(title)

AI总结 本研究通过化学蚀刻合成了一种尺寸为75x25 nm的五边形金双锥体，并与其纵向等离子体共振（PR）在753 nm处进行比较，发现双锥体的吸收光谱质量因子显著高于纳米棒。此外，双锥体的SERS增强因子约为纳米棒的三倍，且其PR红移也比纳米棒大三倍，这表明双锥体对周围介质的折射率变化或介电壳厚度的变化更敏感。实验和理论均证实双锥体作为热敏剂在光热治疗中具有高效性，能够有效杀死大肠杆菌。

Comments 37 pages, 7 figures, 65 references

The Provenance Gap in Clinical AI: Evidence-Traceable Temporal Knowledge Graphs for Rare Disease Reasoning

临床AI中的溯源差距：用于罕见疾病推理的证据可追溯时间知识图谱

Md Shamim Ahmed, Maja Dusanic, Moritz Nikolai Kirschner, Elisabeth Nyoungui, Jana Zschüntzsch, Lukas Galke Poech, Richard Röttger

机构 * Department of Mathematics and Computer Science, University of Southern Denmark（丹麦南方大学数学与计算机科学系） ； Universitätsmedizin Göttingen（哥廷根大学医学中心） 纠错

专题命中 生物医学文本 ：clinical AI(title)

AI总结 本文提出HEG-TKG系统，通过时间知识图谱提升临床推理的证据可追溯性，实现100%证据可验证性，同时保证安全性和完整性。

Comments 32 pages, 9 figures, 7 tables. Will submit to npj Digital Medicine. Supplementary materials included

Advancing Evidence Generation in Biomedical Research Using Natural Hermite and Propensity Score Indices: Applications to External Control Arms

利用自然赫尔米特和倾向分数指数推进生物医学研究中的证据生成：应用于外部对照组

Javier Cabrera, Berhanu Alemayehu, Demissie Alemayehu, Sofia Weigle

专题命中 生物医学文本 ：biomedical(title)

AI总结 本文提出利用自然赫尔米特和倾向分数指数改进生物医学研究中的证据生成，通过模拟数据和临床试验数据展示其在外部对照组应用中的有效性。

Understanding statistics for biomedical research through the lens of replication

通过复制的视角理解生物医学研究中的统计学

Huw Llewelyn

专题命中 生物医学文本 ：biomedical(title)

AI总结 通过复制视角分析生物医学研究中的统计学问题，指出复制概率受样本量和方差影响，并提出改进方法以提高复制可靠性。

Comments 25 pages, 3 figures, 2 tables. This paper includes a large amount of work that was done subsequently after comments and supersedes a previous paper submitted to arXiv (Reference number: 2403.16906. I have not deleted or replaced the latter in case the moderators prefer both papers to be readable side-by-side

MedRule-KG: A Knowledge-Graph--Steered Scaffold for Reliable Mathematical and Biomedical Reasoning

MedRule-KG: 一种基于知识图谱的可靠数学和生物医学推理框架

Crystal Su

专题命中 生物医学文本 ：biomedical(title)

AI总结 MedRule-KG通过知识图谱框架和轻量验证器，提升科学推理和药物发现的可靠性与准确性。

Comments This paper is withdrawn due to issues with attribution and citation accuracy

Rapid and Cost-Effective In situ Fabrication of Nanoporous Membranes in Microfluidic Devices for Biomedical and Environmental Applications

Arijit Mohanta, Zakia Farhat, Yeshudan Bora, Saurabh Dubey, Nafisa Arfa, Dipankar Bandyopadhyay

专题命中 生物医学文本 ：biomedical(title)

Journal ref Springer, Singapore 2025

Tracing Multilingual Knowledge Acquisition Dynamics in Domain Adaptation: A Case Study of English-Japanese Biomedical Adaptation

Xin Zhao, Naoki Yoshinaga, Yuma Tsuta, Akiko Aizawa

机构 * The University of Tokyo（东京大学） ； National Institute of Informatics（日本信息机构） ； Institute of Industrial Science, The University of Tokyo（东京大学工业科学研究所） 纠错

专题命中 生物医学文本 ：biomedical(title)

Comments 22 Pages, Submitted to ARR 2025 Oct

Blind Source Separation in Biomedical Signals Using Variational Methods

Yasaman Torabi, Shahram Shirani, James P. Reilly

专题命中 生物医学文本 ：biomedical(title)

Comments Presented at Southern Ontario Numerical Analysis Day (SONAD'25), Contributed Talk 03

A 40.68-MHz, 200-ns-Settling Active Rectifier and TX-Side Load Monitoring for Minimizing Radiated Power in Biomedical Implants

Ronald Wijermars, Yi-Han Ou-Yang, Sijun Du, Dante Gabriel Muratore

专题命中 生物医学文本 ：biomedical(title)

Dissipative particle dynamics models of encapsulated microbubbles and gas vesicles for biomedical ultrasound simulations

Nikolaos Ntarakas, Maša Lah, Daniel Svenšek, Tilen Potisk, Matej Praprotnik

专题命中 生物医学文本 ：biomedical(title)

Comments 55 pages, 18 figures, 4 tables

KoGNER: A Novel Framework for Knowledge Graph Distillation on Biomedical Named Entity Recognition

Heming Zhang, Wenyu Li, Di Huang, Yinjie Tang, Yixin Chen, Philip Payne, Fuhai Li

专题命中 生物医学文本 ：biomedical(title)