医学 AI - arXivDaily 专题

2305.04344 2023-05-09 cs.CL 78%

Empowering Language Model with Guided Knowledge Fusion for Biomedical Document Re-ranking

Deepak Gupta, Dina Demner-Fushman

专题命中生物医学文本：biomedical(title,abstract)

2304.00958 2023-05-08 cs.CL 78%

DrBERT: A Robust Pre-trained Model in French for Biomedical and Clinical domains

Yanis Labrak, Adrien Bazoge, Richard Dufour, Mickael Rouvier, Emmanuel Morin, Béatrice Daille, Pierre-Antoine Gourraud

专题命中生物医学文本：biomedical(title,abstract)

Comments Accepted at ACL 2023

2210.04705 2023-05-02 cs.CL 78%

Readability Controllable Biomedical Document Summarization

Zheheng Luo, Qianqian Xie, Sophia Ananiadou

专题命中生物医学文本：biomedical(title,abstract)

Comments accepted to the Findings of EMNLP 2022

2209.06453 2023-04-17 cs.CL 78%

Prompt Combines Paraphrase: Teaching Pre-trained Models to Understand Rare Biomedical Words

Haochun Wang, Chi Liu, Nuwa Xi, Sendong Zhao, Meizhi Ju, Shiwei Zhang, Ziheng Zhang, Yefeng Zheng, Bing Qin, Ting Liu

专题命中生物医学文本：biomedical(title,abstract)

Comments Accepted to COLING 2022

2304.05973 2023-04-13 cs.IR cs.CL 78%

HiPrompt: Few-Shot Biomedical Knowledge Fusion via Hierarchy-Oriented Prompting

Jiaying Lu, Jiaming Shen, Bo Xiong, Wenjing Ma, Steffen Staab, Carl Yang

专题命中生物医学文本：biomedical(title,abstract)

Journal ref In Proceedings of the 46th International ACM SIGIR Conference on Research and Development in Information Retrieval (Short-Paper Track), 2023

2304.05268 2023-04-12 cs.CL 78%

An Entity-based Claim Extraction Pipeline for Real-world Biomedical Fact-checking

Amelie Wührl, Lara Grimminger, Roman Klinger

专题命中生物医学文本：biomedical(title,abstract)

Comments Accepted at The Sixth FEVER Workshop

2210.10341 2023-04-04 cs.CL cs.AI 78%

BioGPT: Generative Pre-trained Transformer for Biomedical Text Generation and Mining

Renqian Luo, Liai Sun, Yingce Xia, Tao Qin, Sheng Zhang, Hoifung Poon, Tie-Yan Liu

专题命中生物医学文本：biomedical(title,abstract)

Comments Published at Briefings in Bioinformatics. Code is available at https://github.com/microsoft/BioGPT

Journal ref Briefings in Bioinformatics, 2022;, bbac409

2211.14084 2023-03-14 cond-mat.mtrl-sci cond-mat.soft physics.ins-det 78%

The Complex Systems and Biomedical Sciences group at the ESRF: current status and new opportunities after Extremely Brilliant Source upgrade

Maciej Jankowski, Valentina Belova, Yuriy Chushkin, Federico Zontone, Matteo Levantino, Theyencheri Narayanan, Oleg Konovalov, Annalisa Pastore

专题命中生物医学文本：biomedical(title,abstract)

2106.09421 2023-03-14 math.NA cs.NA 78%

State Estimation with Model Reduction and Shape Variability. Application to biomedical problems

Felipe Galarce, Damiano Lombardi, Olga Mula

专题命中生物医学文本：biomedical(title,abstract)

Journal ref SIAM Journal on Scientific Computing Vol. 44 Is. 3, 2022

2302.04737 2023-02-24 cs.AI 78%

A Biomedical Knowledge Graph for Biomarker Discovery in Cancer

Md. Rezaul Karim, Lina Molinas Comet, Oya Beyan, Dietrich Rebholz-Schuhmann, Stefan Decker

专题命中生物医学文本：biomedical(title)；diagnosis(abstract)

2302.06854 2023-02-15 cs.IR cs.AI 78%

Large-Scale Knowledge Synthesis and Complex Information Retrieval from Biomedical Documents

Shreya Saxena, Raj Sangani, Siva Prasad, Shubham Kumar, Mihir Athale, Rohan Awhad, Vishal Vaddina

专题命中生物医学文本：biomedical(title,abstract)

2207.02056 2023-02-15 cs.DB 78%

Ontology Development Kit: a toolkit for building, maintaining, and standardising biomedical ontologies

Nicolas Matentzoglu, Damien Goutte-Gattat, Shawn Zheng Kai Tan, James P. Balhoff, Seth Carbon, Anita R. Caron, William D. Duncan, Joe E. Flack, Melissa Haendel, Nomi L. Harris, William R Hogan, Charles Tapley Hoyt, Rebecca C. Jackson, HyeongSik Kim, Huseyin Kir, Martin Larralde, Julie A. McMurry, James A. Overton, Bjoern Peters, Clare Pilgrim, Ray Stefancsik, Sofia MC Robb, Sabrina Toro, Nicole A Vasilevsky, Ramona Walls, Christopher J. Mungall, David Osumi-Sutherland

专题命中生物医学文本：biomedical(title,abstract)

Comments 19 pages, 2 supplementary tables, 1 supplementary figure

2302.01588 2023-02-06 cs.CL 78%

Bioformer: an efficient transformer language model for biomedical text mining

Li Fang, Qingyu Chen, Chih-Hsuan Wei, Zhiyong Lu, Kai Wang

专题命中生物医学文本：biomedical(title,abstract)

cs/0611111 2023-02-03 cs.RO cs.MA 78%

Distributed Control of Microscopic Robots in Biomedical Applications

Tad Hogg

专题命中生物医学文本：biomedical(title,abstract)

2210.05598 2023-01-31 cs.CL cs.AI 78%

Enriching Biomedical Knowledge for Low-resource Language Through Large-Scale Translation

Long Phan, Tai Dang, Hieu Tran, Trieu H. Trinh, Vy Phan, Lam D. Chau, Minh-Thang Luong

专题命中生物医学文本：biomedical(title,abstract)

2301.09908 2023-01-25 cs.HC cs.CL 78%

Cross-lingual German Biomedical Information Extraction: from Zero-shot to Human-in-the-Loop

Siting Liang, Mareike Hartmann, Daniel Sonntag

专题命中生物医学文本：biomedical(title,abstract)

2205.08740 2023-01-11 cs.CL cs.AI 78%

A reproducible experimental survey on biomedical sentence similarity: a string-based method sets the state of the art

Alicia Lara-Clares, Juan J. Lastra-Díaz, Ana Garcia-Serrano

专题命中生物医学文本：biomedical(title,abstract)

Comments 48 pages, 4 figures, 17 tables, three appendices not included in pre-print version

2106.07374 2022-12-09 cs.IR stat.AP 78%

Network-based Topic Interaction Map for Big Data Mining of COVID-19 Biomedical Literature

Yeseul Jeon, Dongjun Chung, Jina Park, Ick Hoon Jin

专题命中生物医学文本：biomedical(title,abstract)

2212.00223 2022-12-02 cs.CL 78%

Biomedical NER for the Enterprise with Distillated BERN2 and the Kazu Framework

Wonjin Yoon, Richard Jackson, Elliot Ford, Vladimir Poroshin, Jaewoo Kang

专题命中生物医学文本：biomedical(title,abstract)

Comments EMNLP 2022 - Industry track

2211.15022 2022-11-29 cs.CL 78%

Summer: WeChat Neural Machine Translation Systems for the WMT22 Biomedical Translation Task

Ernan Li, Fandong Meng, Jie Zhou

专题命中生物医学文本：biomedical(title,abstract)

2211.12819 2022-11-24 cs.DL 78%

Tracking biomedical articles along the translational continuum: a measure based on biomedical knowledge representation

Xin Li, Xuli Tang, Wei Lu

专题命中生物医学文本：biomedical(title,abstract)

Comments 26 pages, 11 figures

2211.12124 2022-11-23 cs.CL 78%

A Large-Scale Dataset for Biomedical Keyphrase Generation

Mael Houbre, Florian Boudin, Beatrice Daille

专题命中生物医学文本：biomedical(title,abstract)

Comments Accepted at the 13th International Workshop on Health Text Mining and Information Analysis (LOUHI 2022)

2203.08410 2022-11-08 cs.CL cs.IR 78%

Thinking about GPT-3 In-Context Learning for Biomedical IE? Think Again

Bernal Jiménez Gutiérrez, Nikolas McNeal, Clay Washington, You Chen, Lang Li, Huan Sun, Yu Su

专题命中生物医学文本：biomedical(title,abstract)

Comments EMNLP-Findings 2022

2210.11892 2022-10-24 cs.CL cs.IR 78%

BioLORD: Learning Ontological Representations from Definitions (for Biomedical Concepts and their Textual Descriptions)

François Remy, Kris Demuynck, Thomas Demeester

专题命中生物医学文本：biomedical(title,abstract)

Comments Accepted in Findings of EMNLP 2022

2207.01488 2022-10-12 cs.CY cs.DL 78%

Award rate inequities in biomedical research

Alessandra Zimmermann, Richard Klavans, Heather Offhaus, Teri A. Grieb, Caleb Smith

专题命中生物医学文本：biomedical(title,abstract)

2201.02080 2022-10-07 cs.CL 78%

BERN2: an advanced neural biomedical named entity recognition and normalization tool

Mujeen Sung, Minbyul Jeong, Yonghwa Choi, Donghyeon Kim, Jinhyuk Lee, Jaewoo Kang

专题命中生物医学文本：biomedical(title,abstract)

Comments Published in Bioinformatics 2022. Web service available at http://bern2.korea.ac.kr. Code available at https://github.com/dmis-lab/BERN2

2209.08698 2022-09-20 cs.CL 78%

LED down the rabbit hole: exploring the potential of global attention for biomedical multi-document summarisation

Yulia Otmakhova, Hung Thinh Truong, Timothy Baldwin, Trevor Cohn, Karin Verspoor, Jey Han Lau

专题命中生物医学文本：biomedical(title,abstract)

Comments SDP Workshop at COLING 2022

2209.04308 2022-09-12 cs.CE 78%

Computational reproducibility of Jupyter notebooks from biomedical publications

Sheeba Samuel, Daniel Mietchen

专题命中生物医学文本：biomedical(title,abstract)

2209.01815 2022-09-07 cs.CL 78%

Query-focused Extractive Summarisation for Biomedical and COVID-19 Complex Question Answering

Diego Mollá

专题命中生物医学文本：biomedical(title,abstract)

Comments 10 pages, 2 figures, 7 tables. As published (with minor corrections) in the BioASQ 10 Workshop, Proceedings of the Working Notes of CLEF 2022 - Conference and Labs of the Evaluation Forum

2208.10742 2022-08-24 physics.med-ph 78%

Advances in 2D Based Field Effect Transistors as Biosensing Platforms: From Principle to Biomedical Applications

Foad Ghasemi, Abdollah Salimi

专题命中生物医学文本：biomedical(title,abstract)

1. 生物医学文本 4507 篇

Empowering Language Model with Guided Knowledge Fusion for Biomedical Document Re-ranking

DrBERT: A Robust Pre-trained Model in French for Biomedical and Clinical domains

Readability Controllable Biomedical Document Summarization

Prompt Combines Paraphrase: Teaching Pre-trained Models to Understand Rare Biomedical Words

HiPrompt: Few-Shot Biomedical Knowledge Fusion via Hierarchy-Oriented Prompting

An Entity-based Claim Extraction Pipeline for Real-world Biomedical Fact-checking

BioGPT: Generative Pre-trained Transformer for Biomedical Text Generation and Mining

The Complex Systems and Biomedical Sciences group at the ESRF: current status and new opportunities after Extremely Brilliant Source upgrade

State Estimation with Model Reduction and Shape Variability. Application to biomedical problems

A Biomedical Knowledge Graph for Biomarker Discovery in Cancer

Large-Scale Knowledge Synthesis and Complex Information Retrieval from Biomedical Documents

Ontology Development Kit: a toolkit for building, maintaining, and standardising biomedical ontologies

Bioformer: an efficient transformer language model for biomedical text mining

Distributed Control of Microscopic Robots in Biomedical Applications

Enriching Biomedical Knowledge for Low-resource Language Through Large-Scale Translation

Cross-lingual German Biomedical Information Extraction: from Zero-shot to Human-in-the-Loop

A reproducible experimental survey on biomedical sentence similarity: a string-based method sets the state of the art

Network-based Topic Interaction Map for Big Data Mining of COVID-19 Biomedical Literature

Biomedical NER for the Enterprise with Distillated BERN2 and the Kazu Framework

Summer: WeChat Neural Machine Translation Systems for the WMT22 Biomedical Translation Task

Tracking biomedical articles along the translational continuum: a measure based on biomedical knowledge representation

A Large-Scale Dataset for Biomedical Keyphrase Generation

Thinking about GPT-3 In-Context Learning for Biomedical IE? Think Again

BioLORD: Learning Ontological Representations from Definitions (for Biomedical Concepts and their Textual Descriptions)

Award rate inequities in biomedical research

BERN2: an advanced neural biomedical named entity recognition and normalization tool

LED down the rabbit hole: exploring the potential of global attention for biomedical multi-document summarisation

Computational reproducibility of Jupyter notebooks from biomedical publications

Query-focused Extractive Summarisation for Biomedical and COVID-19 Complex Question Answering

Advances in 2D Based Field Effect Transistors as Biosensing Platforms: From Principle to Biomedical Applications