XtraLight-MedMamba for Classification of Neoplastic Tubular Adenomas
XtraLight-MedMamba用于神经内分泌瘤分类
Aqsa Sultana, Rayan Afsar, Ahmed Rahu, Surendra P. Singh, Brian Shula, Brandon Combs, Derrick Forchetti, Vijayan K. Asari
机构
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Vision Lab and Dept. of Electrical and Computer Engineering, University of Dayton(视觉实验室和电气与计算机工程系,代顿大学)
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Dept. of Computer Science, University of Georgia(计算机科学系,佐治亚大学)
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The University of Toledo Medical Center(托莱多大学医学中心)
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Honeywell International Inc.(霍尼韦尔国际公司)
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South Bend Medical Foundation(南本迪医疗基金会)
Atlas 2 -- Foundation models for clinical deployment
Atlas 2 -- 临床应用的基础模型
Maximilian Alber, Timo Milbich, Alexandra Carpen-Amarie, Stephan Tietz, Jonas Dippel, Lukas Muttenthaler, Beatriz Perez Cancer, Alessandro Benetti, Panos Korfiatis, Elias Eulig, Jérôme Lüscher, Jiasen Wu, Sayed Abid Hashimi, Gabriel Dernbach, Simon Schallenberg, Neelay Shah, Moritz Krügener, Aniruddh Jammoria, Jake Matras, Patrick Duffy, Matt Redlon, Philipp Jurmeister, David Horst, Lukas Ruff, Klaus-Robert Müller, Frederick Klauschen, Andrew Norgan
机构
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Aignostics, Germany(德国Aignostics公司)
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Department of Laboratory Medicine and Pathology, Mayo Clinic, Rochester, MN, US(美国梅奥诊所实验室医学与病理学部门)
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Department of Radiology, Mayo Clinic, Rochester MN, US(美国梅奥诊所放射学部门)
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Department of Information Technology, Mayo Clinic, Rochester MN, US(美国梅奥诊所信息技术部门)
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Mayo Clinic, Rochester MN, US(美国梅奥诊所)
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Digital Pathology, Mayo Clinic, Rochester MN, US(美国梅奥诊所数字病理学部门)
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Machine Learning Group, Technische Universität Berlin, Germany(德国柏林技术大学机器学习小组)
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BIFOLD – Berlin Institute for the Foundations of Learning and Data, Germany(德国柏林学习与数据基础研究所)
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Department of Artificial Intelligence, Korea University, Republic of Korea(韩国韩国大学人工智能系)
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Max-Planck Institute for Informatics, Germany(德国马克斯·普朗克信息研究所)
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German Cancer Research Center (DKFZ) & German Cancer Consortium (DKTK), Berlin & Munich Partner Sites, Germany(德国癌症研究中心(DKFZ)及德国癌症联盟(DKTK)柏林与慕尼黑合作站点)
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Institute of Pathology, Ludwig-Maximilians-Universität München, Germany(德国慕尼黑路德维希-马克西米利安大学病理学研究所)
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Institute of Pathology, Charité – Universitätsmedizin Berlin, Germany(德国柏林夏里特大学医学中心病理学研究所)
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Bavarian Cancer Research Center (BZKF), Germany(德国巴伐利亚癌症研究中心(BZKF))
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Helmholtz Munich, Germany(德国海德堡-慕尼黑亥姆霍兹中心)
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Technical University Munich, Germany(德国慕尼黑技术大学)
Atlas H&E-TME: Scalable AI-Based Tissue Profiling at Expert Pathologist-Level Accuracy
Atlas H&E-TME:基于AI的可扩展组织分析,达到专家病理学家级别的准确性
Kai Standvoss, Miriam Hägele, Rosemarie Krupar, Julika Ribbat-Idel, Jennifer Altschüler, Gerrit Erdmann, Hans Pinckaers, Evelyn Ramberger, Madleen Drinkwitz, Ádám Nárai, Alexander Möllers, Katja Lingelbach, Sebastian Kons, Lukas Hönig, Recepcan Adigüzel, Joana Baião, Alberto Megina Gonzalo, Marius Teodorescu, Marie-Lisa Eich, Paolo Chetta, Shakil Merchant, Verena Aumiller, Simon Schallenberg, Andrew Norgan, Klaus-Robert Müller, Lukas Ruff, Maximilian Alber, Frederick Klauschen
机构
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Aignostics, Germany(Aignostics,德国)
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Institute of Pathology, Charité – Universitätsmedizin Berlin, Germany(柏林夏里特医学院病理学研究所)
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Berlin Institute of Health, Charité – Universitätsmedizin Berlin, Germany(柏林夏里特医学院柏林健康研究所)
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Massachusetts General Hospital, Department of Pathology, Harvard Medical School, Boston, MA, US(哈佛医学院麻省总医院病理学系)
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Department of Laboratory Medicine and Pathology, Mayo Clinic, Rochester, MN, US(梅奥诊所检验医学与病理学系)
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Machine Learning Group, Technische Universität Berlin, Germany(柏林工业大学机器学习组)
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BIFOLD – Berlin Institute for the Foundations of Learning and Data, Germany(柏林学习与数据基础研究所)
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Department of Artificial Intelligence, Korea University, Republic of Korea(高丽大学人工智能系)
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Max-Planck Institute for Informatics, Germany(马克斯·普朗克信息学研究所)
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German Cancer Research Center (DKFZ) & German Cancer Consortium (DKTK), Berlin & Munich Partner Sites, Germany(德国癌症研究中心及德国癌症联盟柏林和慕尼黑合作站点)
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Institute of Pathology, Ludwig-Maximilians-Universität München, Germany(慕尼黑大学病理学研究所)
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Bavarian Cancer Research Center (BZKF), Germany(巴伐利亚癌症研究中心)
Critical attention scaling in long-context transformers
长上下文Transformer中的关键注意力缩放
Shi Chen, Zhengjiang Lin, Yury Polyanskiy, Philippe Rigollet
机构
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Department of Mathematics, Massachusetts Institute of Technology(数学系,麻省理工学院)
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Department of Electrical Engineering and Computer Science, Massachusetts Institute of Technology(电气工程与计算机科学系,麻省理工学院)
The PAR dataset: Prostate biopsy whole slide images from an underrepresented Middle Eastern population
PAR数据集:来自中东代表性不足人群的前列腺活检全切片图像
Peshawa J. Muhammad Ali, Navin Vincent, Saman S. Abdulla, Han N. Mohammed Fadhl, Anders Blilie, Kelvin Szolnoky, Julia Anna Mielcarz, Xiaoyi Ji, Kimmo Kartasalo, Abdulbasit K. Al-Talabani, Nita Mulliqi
Evaluating Vision Foundation Models for Pixel and Object Classification in Microscopy
评估显微镜中用于像素和物体分类的视觉基础模型
Carolin Teuber, Anwai Archit, Tobias Boothe, Peter Ditte, Jochen Rink, Constantin Pape
机构
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Georg-August-University Göttingen, Institute of Computer Science Department of Tissue Dynamics
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Regeneration, Max Planck Institute for Multidisciplinary Sciences, Göttingen Georg-August-University Göttingen, Faculty of Biology
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Psychology CAIMed - Lower Saxony Center for AI \& Causal Methods in Medicine, Göttingen Cluster of Excellence Multiscale Bioimaging (MBExC), Georg-August-University Göttingen
Comments27 pages, 8 figures, 8 tables. Added supplementary experiment: independent validation of the small-bias regime, to break the circularity in bias estimation
Do Foundation Models See Biology? Evaluating Attention Coherence with Spatial Transcriptomics in Glioblastoma
基础模型是否理解生物学?利用空间转录组学评估胶质母细胞瘤中的注意力一致性
Dilakshan Srikanthan, Amoon Jamzad, Paul Wilson, Nooshin Maghsoodi, Robert Policelli, Gabor Fichtinger, John F. Rudan, Parvin Mousavi
机构
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Translational Medicine, School of Medicine, Queen’s University, Kingston, ON, Canada(转化医学、医学院、皇后大学、金斯顿,ON,加拿大)
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School of Computing, Queen’s University, Kingston, ON, Canada(计算学院、皇后大学、金斯顿,ON,加拿大)
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Department of Surgery, Queen’s University, Kingston, ON, Canada(外科部门、皇后大学、金斯顿,ON,加拿大)
Enabling Progressive Whole-slide Image Analysis with Multi-scale Pyramidal Network
利用多尺度金字塔网络实现渐进式全切片图像分析
Shuyang Wu, Yifu Qiu, Ines P Nearchou, Sandrine Prost, Jonathan A Fallowfield, Hakan Bilen, Timothy J Kendall
机构
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Institute for Regeneration and Repair, University of Edinburgh(再生与修复研究所,爱丁堡大学)
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School of Informatics, University of Edinburgh(信息学院,爱丁堡大学)
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Indica Labs, 8700 Education Pl NW, Bldg. B Albuquerque, US(Indica实验室,美国阿尔伯克基8700教育大道西北区B座)
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Medical School, University of St Andrews(医学学校,圣安德鲁大学)
机构
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College of Computer Science and Technology, College of Data Science, Taiyuan University of Technology(太原科技大学计算机科学与技术学院、数据科学学院)
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College of Humanities, Law and Foreign Languages, Taiyuan University of Technology(太原科技大学人文学院、法律与外语学院)
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College of Artificial Intelligence, Taiyuan University of Technology(太原科技大学人工智能学院)
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School of Cyberspace Security, Beijing University of Posts and Telecommunications(北京邮电大学网络安全学院)
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School of Mathematics, Taiyuan University of Technology(太原科技大学数学学院)
Spatial navigation in preclinical Alzheimer's disease: A review
阿尔茨海默病前期阶段的空间导航:综述
Syrine Salouhou, Victor Gilles, Remi Vallée, Gillian T. Coughlan, Romain Bachelet, Michael Hornberger, Hugo Spiers, Antoine Coutrot, Antoine Garnier-Crussard
Comments4 pages, two-column. v2: corrected the definition of representation (existential, not universal); demand now stated as a criterion rather than a set of outputs; minor notation fixes
Learning from Lost Provenance: Multiple Instance Learning for Cancer Registry Tumor Group Classification
从丢失的溯源信息中学习:用于癌症登记肿瘤组分类的多实例学习
Leonard Ruocco, Jonathan Simkin, Lovedeep Gondara, Gregory Arbour, Raymond Ng
机构
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British Columbia Cancer Registry, Provincial Health Services Authority(不列颠哥伦比亚癌症登记处,省级卫生服务管理局)
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University of British Columbia(英属哥伦比亚大学)
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Data Science Institute, University of British Columbia(英属哥伦比亚大学数据科学研究所)