Robust Biomedical Publication Type and Study Design Classification with Knowledge-Guided Perturbations
基于知识引导扰动的鲁棒生物医学出版物类型与研究设计分类
Shufan Ming, Joe D. Menke, Neil R. Smalheiser, Halil Kilicoglu
机构
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School of Information Sciences(信息科学学院)
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University of Illinois Urbana-Champaign(伊利诺伊大学厄巴纳-香槟分校)
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Department of Psychiatry(精神病学系)
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University of Illinois Chicago(伊利诺伊大学芝加哥分校)
Guangyu Wang, Jingkun Yue, Siqi Zhang, Yu Liu, Xiaoyu Wang, Mingyuan Meng, Changwei Ji, Zongbo Han, Yulin Wang, Yang Yue, Frank Fu, Ting Chen, Song Wu, Ziwei Liu, Jiangning Song, Ming Li, Gao Huang, Xiaohong Liu, Athanasios Vasilakos, Xingcai Zhang, Ping Zhang, Yong Li
机构
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State Key Laboratory of Networking and Switching Technology, Beijing University of Posts and Telecommunications, Beijing, China(网络与交换技术国家重点实验室,北京邮电大学,北京,中国)
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Department of Engineering Science, University of Oxford, Oxford, United Kingdom(英国牛津大学工程科学系,牛津,英国)
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Institute of Medical Artificial Intelligence, South China Hospital, Medical School, Shenzhen University, Shenzhen, Guangdong, China(医学人工智能研究所,南方医院,医学学院,深圳大学,深圳,广东,中国)
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Zhongguancun Academy & Zhongguancun Institute of Artificial Intelligence, Beijing, China(中关村学院及中关村人工智能研究院,北京,中国)
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Beijing National Research Center for Information Science and Technology (BNRist), Tsinghua University, 100084, Beijing, China(北京信息科学与技术国家研究中心(BNRist),清华大学,100084,北京,中国)
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Department of Chemical and Nano Engineering, University of California, San Diego, La Jolla, CA, USA(美国加州大学圣地亚哥分校化学与纳米工程系,La Jolla,CA,美国)
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Nanyang Technological University, Singapore(新加坡南洋理工大学)
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Monash Biomedicine Discovery Institute and Department of Biochemistry and Molecular Biology, Monash University, Melbourne, Victoria, Australia(莫纳什大学生物医学发现研究所和生物化学与分子生物学系,墨尔本,维多利亚,澳大利亚)
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David R. Cheriton School of Computer Science, University of Waterloo, Waterloo, Ontario, Canada(加拿大滑铁卢大学戴维·R·切里顿计算机科学学校,滑铁卢,安大略,加拿大)
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Department of ICT and Center for AI Research, University of Agder (UiA), Jon Lilletuns vei 9, Grimstad, Norway(挪威阿格德大学(UiA)信息与通信技术系及人工智能研究中心,Jon Lilletuns vei 9,Grimstad,挪威)
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Department of Electronic Engineering, Tsinghua University, Beijing, China(清华大学电子工程系,北京,中国)
AutoForest: Automatically Generating Forest Plots from Biomedical Studies with End-to-End Evidence Extraction and Synthesis
AutoForest: 从生物医学研究中自动生成森林图,实现端到端的证据提取与综合
Massimiliano Pronesti, Angelo Miculescu, Mohsin Kapdi, Paul Flanagan, Oisín Redmond, Joao Bettencourt-Silva, Gurdeep Mannu, Spiros Denaxas, Rui Bebiano Da Providencia E Costa, Anya Belz, Yufang Hou
机构
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IBM Research(IBM研究院)
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Dublin City University(都柏林城市大学)
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UCL(伦敦大学学院)
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University of Oxford(牛津大学)
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IT:U Interdisciplinary Transformation University Austria(奥地利 interdisciplinary Transformation 大学)
Med-V1: Small Language Models for Zero-shot and Scalable Biomedical Evidence Attribution
Med-V1:用于零样本和可扩展生物医学证据归因的小型语言模型
Qiao Jin, Yin Fang, Lauren He, Yifan Yang, Guangzhi Xiong, Zhizheng Wang, Nicholas Wan, Joey Chan, Donald C. Comeau, Robert Leaman, Charalampos S. Floudas, Aidong Zhang, Michael F. Chiang, Yifan Peng, Zhiyong Lu
机构
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Division of Intramural Research, National Library of Medicine, National Institutes of Health(国家医学图书馆内部研究部,国立卫生研究院)
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Department of Computer Science, University of Virginia(弗吉尼亚大学计算机科学系)
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Center for Cancer Research, National Cancer Institute, National Institutes of Health(国家癌症研究所癌症研究中心,国立卫生研究院)
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Department of Population Health Sciences, Weill Cornell Medicine Institute of AI for Digital Health, Weill Cornell Medicine(韦尔·科恩医学中心流行病学与健康科学系,韦尔·科恩医学中心人工智能与数字健康研究所)
机构
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University of California, San Diego(加州大学圣地亚哥分校)
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University of Michigan, Ann Arbor(密歇根大学安娜堡分校)
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The Hong Kong University of Science and Technology, Guangzhou(香港科学与技术大学(广州))
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ShanghaiTech University(上海科技大学)
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University of North Carolina, Chapel Hill(北卡罗来纳大学教堂山分校)
Comments9 pages main text plus appendices, 8 figures. Dataset and benchmark paper. ChronoMedKG released under CC BY 4.0 and ChronoTQA/code under MIT (Zenodo: 10.5281/zenodo.19697542). Under review
YAC: Bridging Natural Language and Interactive Visual Exploration with Generative AI for Biomedical Data Discovery
YAC:通过生成式AI连接自然语言与交互式视觉探索,用于生物医学数据发现
Devin Lange, Shanghua Gao, Pengwei Sui, Priya Misner, Astrid van den Brandt, Austen Money, Nikolay Akhmetov, Lisa Choy, Marinka Zitnik, Nils Gehlenborg
BELIEF: Structured Evidence Modeling and Uncertainty-Aware Fusion for Biomedical Question Answering
BELIEF: 结构化证据建模与不确定性感知融合用于生物医学问答
Chang Zong, Hao Ning, Siliang Tang, Jie Huang, Jian Wan
机构
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School of Computer Science and Technology, Zhejiang University of Science and Technology(浙江理工大学计算机科学与技术学院)
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College of Artificial Intelligence, Zhejiang University(浙江大学人工智能学院)
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Zhejiang Key Laboratory of Biomedical Intelligent Computing Technology, Zhejiang University of Science and Technology(浙江理工大学生物医学智能计算技术重点实验室)
BioXArena: Benchmarking LLM Agents on Multi-Modal Biomedical Machine Learning Tasks
BioXArena:在多模态生物医学机器学习任务上评估LLM代理的基准测试
Loka Li, Duzhen Zhang, Xingbo Du, Leonard Song, Zixiao Wang, Assanali Aukenov, Noel Thomas, Shakhnazar Sailaukan, Yonghan Yang, Feilong Chen, Jiahua Dong, Kun Zhang, Bin Zhang, Le Song
Biomedical systems biology workflow orchestration and execution with PoSyMed
生物医学系统生物学工作流编排与执行与PoSyMed
Simon Süwer, Zoe Chervontseva, Kester Bagemihl, Jan Baumbach, Olga Tsoy, Andreas Maier
机构
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Institute for Computational Systems Biomedicine, University of Hamburg(计算系统生物医学研究所,汉堡大学)
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Faculty of Science, Computer Science, Vrije Universiteit Amsterdam(科学与计算机科学学院,阿姆斯特丹自由大学)
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Department for Mathematics and Computer Science, University of Southern Denmark(数学与计算机科学系,南丹麦大学)
Large Language Models Meet Biomedical Knowledge Graphs for Mechanistically Grounded Therapeutic Prioritization
大型语言模型与生物医学知识图谱结合用于机制性指导的治疗优先级排序
Chih-Hsuan Wei, Chi-Ping Day, Zhizheng Wang, Christine C. Alewine, Betty Tyler, Hasan Slika, David Saraf, Chin-Hsien Tai, Joey Chan, Robert Leaman, Zhiyong Lu
机构
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School of Computer Science and Technology, Zhejiang University of Science and Technology(浙江理工大学计算机科学与技术学院)
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Institute of Medicinal Biotechnology, Chinese Academy of Medical Sciences & Peking Union Medical College(中国医学科学院药物生物技术研究所)
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Zhejiang Key Laboratory of Biomedical Intelligent Computing Technology(浙江省生物医学智能计算技术重点实验室)
A Proposed Biomedical Data Policy Framework to Reduce Fragmentation, Improve Quality, and Incentivize Sharing in Indian Healthcare in the era of Artificial Intelligence and Digital Health
机构
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Post Graduate Institute of Medical Sciences(医学研究生院)
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Amrita School of Medicine, Amrita Vishwa Vidyapeetham(阿姆里塔医学院,阿姆里塔大学)
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All India Institute of Medical Sciences(全印医学科学研究所)