机构
*
Harbin Institute of Technology, Shenzhen, School of Computer Science and Technology(哈尔滨工业大学(深圳)计算机科学与技术学院)
;
National University of Singapore, Department of Electronic and Computer Engineering(新加坡国立大学电子与计算机工程系)
Predicting Immune Biomarkers with MultiModal Mixture-of-Expert Pathology Foundation Models Empowers Precision Oncology
使用多模态混合专家病理基础模型预测免疫生物标志物,赋能精准肿瘤学
Tianyu Liu, Ziqing Wang, Zhaokang Liang, Tong Ding, Peter Humphrey, Lorraine Colón-Cartagena, Emily Ling-Lin Pai, Kenneth Tou En Chang, Mohamed Kahila, Jonathan Chong Kai Liew, Tinglin Huang, Rex Ying, Kaize Ding, Faisal Mahmood, Wengong Jin
机构
*
Program of Computational Biology and Bioinforamtics, Yale University(耶鲁大学计算生物学与生物信息学项目)
;
Broad Institute of MIT and Harvard(麻省理工学院与哈佛大学博德研究所)
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Department of Statistics and Data Science, Northwestern University(西北大学统计与数据科学系)
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Department of Computer Science, Northeastern University(东北大学计算机科学系)
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Department of Computer Science, Harvard University(哈佛大学计算机科学系)
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Department of Pathology, Yale University(耶鲁大学病理学系)
;
Department of Anatomic Pathology and Laboratory Medicine, Hospital of the University of Pennsylvania(宾夕法尼亚大学医院解剖病理学与检验医学系)
;
Department of Pathology and Laboratory Medicine, University of California, San Francisco(加州大学旧金山分校病理学与检验医学系)
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Department of Pathology and Laboratory Medicine, KK Women’s and Children’s Hospital(竹脚妇幼医院病理学与检验医学系)
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Department of Biostatistics, Epidemiology and Informatics, Perelman School of Medicine, University of Pennsylvania(宾夕法尼亚大学佩雷尔曼医学院生物统计学、流行病学与信息学系)
MOOZY: A Patient-First Foundation Model for Computational Pathology
MOOZY: 一种以患者为先的计算病理学基础模型
Yousef Kotp, Vincent Quoc-Huy Trinh, Christopher Pal, Mahdi S. Hosseini
机构
*
CSSE, Concordia University, Montr\' e al, Canada Mila -- Qu\' e bec AI Institute, Montr\' e al, Canada CHUM, Universit\' e de Montr\' e al, Montr\' e al, Canada IRIC, Universit\' e de Montr\' e al, Montr\' e al, Canada Universit\' e de Montr\' e al, Montr\' e al, Canada Canada CIFAR Chair, Polytechnique Montr\' e al, Montr\' e al, Canada Dept.\ of Pathology, McGill University, Montr\' e al, Canada
Navigating Gigapixel Pathology Images with Large Multimodal Models
利用大型多模态模型导航千兆像素病理图像
Thomas A. Buckley, Kian R. Weihrauch, Katherine Latham, Andrew Z. Zhou, Padmini A. Manrai, Arjun K. Manrai
机构
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Department of Biomedical Informatics, Harvard Medical School(哈佛医学院生物医学信息学系)
;
Department of Pathology, Massachusetts General Hospital(麻省总医院病理学系)
;
Department of Pathology and Laboratory Medicine, Brown University(布朗大学病理学与实验室医学系)
机构
*
Department of Computer Science and Engineering, The Hong Kong University of Science and Technology, Hong Kong SAR, China(计算机科学与工程系,香港科学与技术大学,香港特别行政区,中国)
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Department of Pathology, Nanfang Hospital, Southern Medical University, Guangzhou, China(pathology department, 南方医科大学南芳医院,广州,中国)
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Department of Pathology, School of Basic Medical Sciences, Southern Medical University, Guangzhou, China(pathology department, 南方医科大学基础医学学院,广州,中国)
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Guangdong Province Key Laboratory of Molecular Tumor Pathology, Guangzhou, China(广东省分子肿瘤病理学重点实验室,广州,中国)
;
Jinfeng Laboratory, Chongqing, China(金风实验室,重庆,中国)
机构
*
Key Laboratory of New Generation Artificial Intelligence Technology and Its Interdisciplinary Applications (Southeast University), Ministry of Education(新一代人工智能技术及其交叉应用重点实验室(东南大学),教育部)
;
Centre for Innovation and Precision Eye Health, Yong Loo Lin School of Medicine, National University of Singapore(创新与精准眼健康中心,新加坡国立大学 Yong Loo Lin 医学院)
;
Department of Ophthalmology, Yong Loo Lin School of Medicine, National University of Singapore(眼科学系,新加坡国立大学 Yong Loo Lin 医学院)
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Department of Biostatistics, Center for Global Health, School of Public Health, Nanjing Medical University(生物统计学系,全球健康中心,南京医科大学)
;
Institute of High-Performance Computing, Agency for Science, Technology and Research(高性能计算研究所,科技研究局)
Benchmarking Pathology Foundation Models for Spatial Domain Understanding
病理基础模型在空间域理解中的基准测试
Bokai Zhao, Yiyang Zhang, Yuanchi Zhu, Hanqing Chao, Long Bai, Tai Ma, Minfeng Xu, Ming Song, Tianzi Jiang
机构
*
School of Artificial Intelligence, University of Chinese Academy of Sciences(中国科学院大学人工智能学院)
;
Brainnetome Center, Institute of Automation, Chinese Academy of Sciences(中国科学院自动化研究所脑网膜工程中心)
;
Beijing Key Laboratory of Brainnetome and Brain-Computer Interface, Institute of Automation, Chinese Academy of Sciences(中国科学院自动化研究所北京脑网膜与脑机接口重点实验室)
;
DAMO Academy, Alibaba Group(阿里云达摩院)
;
ShanghaiTech University(上海科技大学)
Discrepancy Minimization Improves Cross-Hospital Robustness in Digital Pathology
差异最小化提升数字病理学中的跨医院鲁棒性
Ben Vardi, Dana Schonberger, Yuval Friedmann, Zohar Yakhini, Iris Barshack, Alexander Loebel, Ariel Shamir
机构
*
Reichman University, Herzliya, Israel(以色列海法大学)
;
Institute of Pathology, Sheba Medical Center, Ramat-Gan, Israel(以色列沙巴医疗中心病理研究所)
;
Technion - Israel Institute of Technology, Haifa, Israel(以色列技术学院)
Generative Deep Learning for Computational Destaining and Restaining of Unregistered Digital Pathology Images
生成式深度学习用于未注册数字病理图像的计算脱色和复染
Aarushi Kulkarni, Alarice Lowe, Pratik Shah
机构
*
Department of Computer Science University of California Irvine, CA, USA(计算机科学系 加州大学 伊藤市 加州 USA)
;
Department of Pathology Stanford University Stanford, CA, USA(病理学系 斯坦福大学 斯坦福市 加州 USA)
Enabling clinical use of foundation models for computational pathology
使计算病理学基础模型在临床应用中发挥作用
Audun L Henriksen, Ole-Johan Skrede, Lisa van der Schee, Enric Domingo, Karolina Cyll, Sepp de Raedt, Ilyá Kostolomov, Jennifer Hay, Wanja Kildal, Joakim Kalsnes, Robert W Williams, Manohar Pradhan, John Arne Nesheim, Hanne Askautrud, Maria Isaksen, Karmele Saez de Gordoa, Miriam Cuatrecasas, Joanne Edwards, TransSCOT group, Arild Nesbakken, Neil A Shepherd, Ian Tomlinson, Daniel-Christoph Wagner, Rachel Kerr, Tarjei Sveinsgjerd Hveem, Knut Liestøl, Yoshiaki Nakamura, Marco Novelli, Masaaki Miyo, Sebastian Försch, David N Church, Miangela M Lacle, David J Kerr, Andreas Kleppe
机构
*
Institute for Cancer Genetics and Informatics, Oslo University Hospital(癌症遗传学与信息学研究所,奥斯陆大学医院)
;
Department of Pathology, University Medical Center Utrecht(病理学系,乌得勒支大学医学中心)
;
Department of Oncology, University of Oxford(肿瘤学系,牛津大学)
;
CRUK Beatson Institute of Cancer Research, Garscube Estate(CRUK贝茨癌症研究中心,加尔斯克里特庄园)
;
Glasgow Tissue Research Facility, University of Glasgow, Queen Elizabeth University Hospital(格拉斯哥组织研究设施,格拉斯哥大学,伊丽莎白女王大学医院)
;
Area for Improvement and Digital Transformation, Norwegian Offshore Directorate(改进与数字化转型部门,挪威海上管理局)
;
Pathology Department, Hospital Clínic, Barcelona, Spain(病理学系,巴塞罗那医院,西班牙)
;
Institut d’Investigacions Biomèdiques August Pi I Sunyer (IDIBAPS), Barcelona, Spain(August Pi I Sunyer生物医学研究所(IDIBAPS),巴塞罗那,西班牙)
;
Department of Clinical Foundations, Universitat de Barcelona(临床基础系,巴塞罗那大学)
;
School of Cancer Sciences, Wolfson Wohl Cancer Research Centre, University of Glasgow(癌症科学学院,沃尔夫森沃尔夫癌症研究中心,格拉斯哥大学)
;
Institute of Clinical Medicine, University of Oslo(临床医学研究所,奥斯陆大学)
;
Department of Gastrointestinal Surgery, Oslo University Hospital(胃肠外科系,奥斯陆大学医院)
机构
*
Tsinghua Shenzhen International Graduate School, Tsinghua University(清华大学深圳国际研究生院,清华大学)
;
Research Institute of Tsinghua, Pearl River Delta(清华大学 Pearl River Delta 研究院)
;
The Chinese University of Hong Kong, ShenZhen(香港中文大学(深圳))
Dino-NestedUNet: Unlocking Foundation Vision Encoders for Pathology Tumor Bulk Segmentation via Dense Decoding
Dino-NestedUNet:通过密集解码解锁基础视觉编码器用于病理肿瘤肿块分割
Tianyang Wang, Ziyu Su, Abdul Rehman Akbar, Usama Sajjad, Usman Afzaal, Lina Gokhale, Charles Rabolli, Wei Chen, Anil Parwani, Muhammad Khalid Khan Niazi
机构
*
Department of Pathology, College of Medicine, The Ohio State University Wexner Medical Center, Columbus, OH, USA(病理学系,医学学院,俄亥俄州立大学韦克斯纳医学中心,哥伦布,OH,USA)
;
Department of Biomedical Engineering, The Ohio State University, Columbus, OH, USA(生物医学工程系,俄亥俄州立大学,哥伦布,OH,USA)
PA-TCNet: Pathology-Aware Temporal Calibration with Physiology-Guided Target Refinement for Cross-Subject Motor Imagery EEG Decoding in Stroke Patients
PA-TCNet:基于病理意识的时序校准与生理引导的目标细化用于中风患者跨受试者运动想象EEG解码
Xiangkai Wang, Yun Zhao, Dongyi He, Qingling Xia, Gen Li, Nizhuan Wang, Ningxiao Peng, Bin Jiang
机构
*
School of Artificial Intelligence, Chongqing University of Technology(重庆理工大学人工智能学院)
;
Chongqing Key Laboratory of Embodied Intelligence Perception and Autonomous Learning for Humanoid Robots(重庆 embodied 智能感知与人形机器人自主学习关键实验室)
;
Key Laboratory of Advanced Equipment Intelligence of the Chongqing Education Commission(重庆市教育委员会先进设备智能关键实验室)
;
School of Smart Health, Chongqing Polytechnic University of Electronic Technology(重庆电子工程职业大学智能健康学院)
;
Department of Language Science and Technology, The Hong Kong Polytechnic University(香港理工大学语言科学与技术系)
;
School of Pharmacy and Bioengineering, Chongqing University of Technology(重庆理工大学药学院与生物工程学院)
;
School of Computer Science and Engineering, Chongqing University of Technology(重庆理工大学计算机科学与工程学院)
MorphDistill: Distilling Unified Morphological Knowledge from Pathology Foundation Models for Colorectal Cancer Survival Prediction
MorphDistill: 从病理基础模型中提取统一形态学知识以预测结直肠癌生存率
Hikmat Khan, Usama Sajjad, Metin N. Gurcan, Anil Parwani, Wendy L. Frankel, Wei Chen, Muhammad Khalid Khan Niazi
机构
*
Department of Pathology, College of Medicine, The Ohio State University Wexner Medical Center(俄亥俄州立大学医学学院病理学系,韦克斯纳医学中心)
;
Center for Artificial Intelligence Research, Wake Forest University School of Medicine(威克森林大学医学院人工智能研究中心)
Resolving gradient pathology in physics-informed epidemiological models
在流行病学模型中解决梯度病态
Nickson Golooba, Woldegebriel Assefa Woldegerima
机构
*
Disease-informed Modeling, Methods & Systems (DIMMS) Lab, Department of Mathematics and Statistics, York University, Toronto, Canada(疾病导向建模、方法与系统实验室,数学与统计学系,约克大学,多伦多,加拿大)
RANGER: Sparsely-Gated Mixture-of-Experts with Adaptive Retrieval Re-ranking for Pathology Report Generation
RANGER: 用于病理报告生成的稀疏门控专家混合模型与自适应检索重排序
Yixin Chen, Ziyu Su, Hikmat Khan, Muhammad Khalid Khan Niazi
机构
*
Department of Biomedical Engineering, The Ohio State University(生物医学工程系,俄亥俄州立大学)
;
Department of Pathology, The Ohio State University(病理学系,俄亥俄州立大学)
A protocol for evaluating robustness to H&E staining variation in computational pathology models
评估计算病理学模型对苏木精-伊红染色变异鲁棒性的协议
Lydia A. Schönpflug, Nikki van den Berg, Sonali Andani, Nanda Horeweg, Jurriaan Barkey Wolf, Tjalling Bosse, Viktor H. Koelzer, Maxime W. Lafarge
机构
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Department of Biomedical Engineering, University of Basel(巴塞尔大学生物医学工程系)
;
Institute of Medical Genetics and Pathology, University Hospital Basel(巴塞尔大学医学遗传学与病理学研究所)
;
Department of Pathology, Leiden University Medical Center(莱顿大学医学中心病理学系)
;
Department of Radiation Oncology, Leiden University Medical Center(莱顿大学医学中心放射肿瘤学系)