医学 AI - arXivDaily 专题

2401.00579 2024-01-02 cs.CL cs.AI cs.LG 79%

Exploring the Effectiveness of Instruction Tuning in Biomedical Language Processing

Omid Rohanian, Mohammadmahdi Nouriborji, David A. Clifton

专题命中生物医学文本：biomedical(title,abstract)；分类 cs.LG

2312.15550 2023-12-27 cs.CL cs.AI cs.LG 79%

Multi-level biomedical NER through multi-granularity embeddings and enhanced labeling

Fahime Shahrokh, Nasser Ghadiri, Rasoul Samani, Milad Moradi

专题命中生物医学文本：biomedical(title,abstract)；分类 cs.LG

2312.09806 2023-12-18 cs.CL cs.AI cs.LG 79%

Improving Biomedical Entity Linking with Retrieval-enhanced Learning

Zhenxi Lin, Ziheng Zhang, Xian Wu, Yefeng Zheng

专题命中生物医学文本：biomedical(title,abstract)；分类 cs.LG

Comments Accepted by ICASSP 2024

2312.03796 2023-12-08 cs.LG cs.AI 79%

Multi-Scale and Multi-Modal Contrastive Learning Network for Biomedical Time Series

Hongbo Guo, Xinzi Xu, Hao Wu, Guoxing Wang

专题命中生物医学文本：biomedical(title,abstract)；分类 cs.LG

Comments 4 pages, 3 figures, submitted to ICASSP 2024

2210.11913 2023-11-21 cs.CL cs.LG 79%

NEREL-BIO: A Dataset of Biomedical Abstracts Annotated with Nested Named Entities

Natalia Loukachevitch, Suresh Manandhar, Elina Baral, Igor Rozhkov, Pavel Braslavski, Vladimir Ivanov, Tatiana Batura, Elena Tutubalina

专题命中生物医学文本：biomedical(title,abstract)；分类 cs.LG

Comments Submitted to Bioinformatics (Publisher: Oxford University Press)

Journal ref Bioinformatics, Volume 39, Issue 4, April 2023, btad161

2311.03113 2023-11-07 cs.CL cs.IR cs.LG 79%

Injecting Categorical Labels and Syntactic Information into Biomedical NER

Sumam Francis, Marie-Francine Moens

专题命中生物医学文本：biomedical(title,abstract)；分类 cs.LG

Comments Proceedings of the 18th Conference on Computational Intelligence Methods for Bioinformatics & Biostatistics (CIBB 2023)

2310.10571 2023-10-17 cs.CL cs.LG 79%

Emerging Challenges in Personalized Medicine: Assessing Demographic Effects on Biomedical Question Answering Systems

Sagi Shaier, Kevin Bennett, Lawrence Hunter, Katharina von der Wense

专题命中生物医学文本：biomedical(title,abstract)；分类 cs.LG

Comments Accepted to IJCNLP-AACL 2023

2309.15757 2023-10-17 cs.LG cs.AI 79%

Latent Graphs for Semi-Supervised Learning on Biomedical Tabular Data

Boshko Koloski, Nada Lavrač, Senja Pollak, Blaž Škrlj

专题命中生物医学文本：biomedical(title,abstract)；分类 cs.LG

Comments Accepted at IJCLR 2023

2309.01808 2023-10-12 cs.IR cs.AI cs.LG 79%

DiscoverPath: A Knowledge Refinement and Retrieval System for Interdisciplinarity on Biomedical Research

Yu-Neng Chuang, Guanchu Wang, Chia-Yuan Chang, Kwei-Herng Lai, Daochen Zha, Ruixiang Tang, Fan Yang, Alfredo Costilla Reyes, Kaixiong Zhou, Xiaoqian Jiang, Xia Hu

专题命中生物医学文本：biomedical(title,abstract)；分类 cs.LG

2309.15294 2023-10-06 physics.flu-dyn cs.LG 79%

Multiple Case Physics-Informed Neural Network for Biomedical Tube Flows

Hong Shen Wong, Wei Xuan Chan, Bing Huan Li, Choon Hwai Yap

专题命中生物医学文本：biomedical(title,abstract)；分类 cs.LG

Comments 24 pages, 8 figures, 5 tables

2309.01370 2023-09-06 cs.CL cs.AI cs.IR cs.LG 79%

ReOnto: A Neuro-Symbolic Approach for Biomedical Relation Extraction

Monika Jain, Kuldeep Singh, Raghava Mutharaju

专题命中生物医学文本：biomedical(title,abstract)；分类 cs.LG

Comments Accepted in ECML 2023

2305.19979 2023-09-01 cs.LG cs.AI 79%

Knowledge Graph Embeddings in the Biomedical Domain: Are They Useful? A Look at Link Prediction, Rule Learning, and Downstream Polypharmacy Tasks

Aryo Pradipta Gema, Dominik Grabarczyk, Wolf De Wulf, Piyush Borole, Javier Antonio Alfaro, Pasquale Minervini, Antonio Vergari, Ajitha Rajan

专题命中生物医学文本：biomedical(title,abstract)；分类 cs.LG

2306.04504 2023-08-25 cs.CL cs.LG 79%

Evaluation of ChatGPT on Biomedical Tasks: A Zero-Shot Comparison with Fine-Tuned Generative Transformers

Israt Jahan, Md Tahmid Rahman Laskar, Chun Peng, Jimmy Huang

专题命中生物医学文本：biomedical(title,abstract)；分类 cs.LG

Comments Accepted by BioNLP@ACL 2023

2308.04028 2023-08-09 cs.CL cs.AI cs.IR cs.LG 79%

Top K Relevant Passage Retrieval for Biomedical Question Answering

Shashank Gupta

专题命中生物医学文本：biomedical(title,abstract)；分类 cs.LG

Comments 6 pages, 5 figures. arXiv admin note: text overlap with arXiv:2004.04906 by other authors

2307.08411 2023-07-18 cs.AI cs.LG cs.LO 79%

Neurosymbolic AI for Reasoning on Biomedical Knowledge Graphs

Lauren Nicole DeLong, Ramon Fernández Mir, Zonglin Ji, Fiona Niamh Coulter Smith, Jacques D. Fleuriot

专题命中生物医学文本：biomedical(title,abstract)；分类 cs.LG

Comments Proceedings of the $\mathit{40}^{th}$ International Conference on Machine Learning: Workshop on Knowledge and Logical Reasoning in the Era of Data-driven Learning (https://klr-icml2023.github.io/schedule.html). PMLR 202, 2023. Condensed, workshop-ready version of previous survey, arXiv:2302.07200 , which is under review. 13 pages (9 content, 4 references), 3 figures, 1 table

2307.02094 2023-07-06 cs.LG cs.AI 79%

DARE: Towards Robust Text Explanations in Biomedical and Healthcare Applications

Adam Ivankay, Mattia Rigotti, Pascal Frossard

专题命中生物医学文本：biomedical(title,abstract)；分类 cs.LG

Comments Accepted at 61st Annual Meeting of the Association for Computational Linguistics (ACL) 2023

2305.19120 2023-05-31 cs.CL cs.LG 79%

Comparing and combining some popular NER approaches on Biomedical tasks

Harsh Verma, Sabine Bergler, Narjesossadat Tahaei

专题命中生物医学文本：biomedical(title,abstract)；分类 cs.LG

Comments Accepted to the ACL BioNLP Workshop, 2023

2305.13120 2023-05-23 cs.CL cs.LG 79%

Partial Annotation Learning for Biomedical Entity Recognition

Liangping Ding, Giovanni Colavizza, Zhixiong Zhang

专题命中生物医学文本：biomedical(title,abstract)；分类 cs.LG

Comments 9 pages, 4 figures, 2 tables

2303.00534 2023-03-02 cs.CV cs.CL 79%

RAMM: Retrieval-augmented Biomedical Visual Question Answering with Multi-modal Pre-training

Zheng Yuan, Qiao Jin, Chuanqi Tan, Zhengyun Zhao, Hongyi Yuan, Fei Huang, Songfang Huang

专题命中生物医学文本：biomedical(title,abstract)；分类 cs.CV

1907.07322 2023-02-28 cs.HC cs.CL cs.LG 79%

MedCATTrainer: A Biomedical Free Text Annotation Interface with Active Learning and Research Use Case Specific Customisation

Thomas Searle, Zeljko Kraljevic, Rebecca Bendayan, Daniel Bean, Richard Dobson

专题命中生物医学文本：biomedical(title,abstract)；分类 cs.LG

Journal ref EMNLP/IJCNLP 2019

2302.00981 2023-02-07 cs.LG 79%

Predicting Molecule-Target Interaction by Learning Biomedical Network and Molecule Representations

Jinjiang Guo, Jie Li

专题命中生物医学文本：biomedical(title,abstract)；分类 cs.LG

Comments 9 pages, 6 figures. arXiv admin note: substantial text overlap with arXiv:2102.01649

2008.10813 2023-01-26 cs.CL cs.AI cs.IR cs.LG 79%

Conceptualized Representation Learning for Chinese Biomedical Text Mining

Ningyu Zhang, Qianghuai Jia, Kangping Yin, Liang Dong, Feng Gao, Nengwei Hua

专题命中生物医学文本：biomedical(title,abstract)；分类 cs.LG

Comments WSDM2020 Health Day

2205.04652 2023-01-13 cs.CL cs.AI cs.IR cs.LG 79%

SuMe: A Dataset Towards Summarizing Biomedical Mechanisms

Mohaddeseh Bastan, Nishant Shankar, Mihai Surdeanu, Niranjan Balasubramanian

专题命中生物医学文本：biomedical(title,abstract)；分类 cs.LG

Comments Accepter at LREC2022

2202.02432 2022-12-22 cs.CL cs.AI cs.LG 79%

Transformers and the representation of biomedical background knowledge

Oskar Wysocki, Zili Zhou, Paul O'Regan, Deborah Ferreira, Magdalena Wysocka, Dónal Landers, André Freitas

专题命中生物医学文本：biomedical(title,abstract)；分类 cs.LG

Comments 25 pages, 12 figures, supplementary methods, tables and figures at the end of the manuscript

Journal ref Computational Linguistics 2022

2211.15616 2022-11-29 cs.LG cs.AI 79%

Weight Predictor Network with Feature Selection for Small Sample Tabular Biomedical Data

Andrei Margeloiu, Nikola Simidjievski, Pietro Lio, Mateja Jamnik

专题命中生物医学文本：biomedical(title,abstract)；分类 cs.LG

Comments Accepted to AAAI-2023

2211.13102 2022-11-24 eess.SP 79%

An Adaptive Event-based Data Converter for Always-on Biomedical Applications at the Edge

Mohammadali Sharifshazileh, Giacomo Indiveri

专题命中生物医学文本：biomedical(title,abstract)；分类 eess.SP

Comments 5 pages, 5 figures

2211.05980 2022-11-14 cs.CL cs.LG 79%

Hardness-guided domain adaptation to recognise biomedical named entities under low-resource scenarios

Ngoc Dang Nguyen, Lan Du, Wray Buntine, Changyou Chen, Richard Beare

专题命中生物医学文本：biomedical(title,abstract)；分类 cs.LG

2211.05351 2022-11-11 cs.AI cs.LG cs.SI 79%

Biomedical Multi-hop Question Answering Using Knowledge Graph Embeddings and Language Models

Dattaraj J. Rao, Shraddha S. Mane, Mukta A. Paliwal

专题命中生物医学文本：biomedical(title,abstract)；分类 cs.LG

2210.06346 2022-10-24 cs.CL cs.LG 79%

Predicting the clinical citation count of biomedical papers using multilayer perceptron neural network

Xin Li, Xuli Tang, Qikai Cheng

专题命中生物医学文本：biomedical(title,abstract)；分类 cs.LG

Comments 25 pages, 8 figures

Journal ref Journal of Informetrics 2022

2209.07859 2022-10-24 cs.IR cs.AI cs.LG 79%

Extracting Biomedical Factual Knowledge Using Pretrained Language Model and Electronic Health Record Context

Zonghai Yao, Yi Cao, Zhichao Yang, Vijeta Deshpande, Hong Yu

专题命中生物医学文本：biomedical(title,abstract)；分类 cs.LG

Comments Presented at the AMIA 2022 Annual Symposium as an oral paper. Revised some content in Introduction and Related Work section

1. 生物医学文本 4499 篇

Exploring the Effectiveness of Instruction Tuning in Biomedical Language Processing

Multi-level biomedical NER through multi-granularity embeddings and enhanced labeling

Improving Biomedical Entity Linking with Retrieval-enhanced Learning

Multi-Scale and Multi-Modal Contrastive Learning Network for Biomedical Time Series

NEREL-BIO: A Dataset of Biomedical Abstracts Annotated with Nested Named Entities

Injecting Categorical Labels and Syntactic Information into Biomedical NER

Emerging Challenges in Personalized Medicine: Assessing Demographic Effects on Biomedical Question Answering Systems

Latent Graphs for Semi-Supervised Learning on Biomedical Tabular Data

DiscoverPath: A Knowledge Refinement and Retrieval System for Interdisciplinarity on Biomedical Research

Multiple Case Physics-Informed Neural Network for Biomedical Tube Flows

ReOnto: A Neuro-Symbolic Approach for Biomedical Relation Extraction

Knowledge Graph Embeddings in the Biomedical Domain: Are They Useful? A Look at Link Prediction, Rule Learning, and Downstream Polypharmacy Tasks

Evaluation of ChatGPT on Biomedical Tasks: A Zero-Shot Comparison with Fine-Tuned Generative Transformers

Top K Relevant Passage Retrieval for Biomedical Question Answering

Neurosymbolic AI for Reasoning on Biomedical Knowledge Graphs

DARE: Towards Robust Text Explanations in Biomedical and Healthcare Applications

Comparing and combining some popular NER approaches on Biomedical tasks

Partial Annotation Learning for Biomedical Entity Recognition

RAMM: Retrieval-augmented Biomedical Visual Question Answering with Multi-modal Pre-training

MedCATTrainer: A Biomedical Free Text Annotation Interface with Active Learning and Research Use Case Specific Customisation

Predicting Molecule-Target Interaction by Learning Biomedical Network and Molecule Representations

Conceptualized Representation Learning for Chinese Biomedical Text Mining

SuMe: A Dataset Towards Summarizing Biomedical Mechanisms

Transformers and the representation of biomedical background knowledge

Weight Predictor Network with Feature Selection for Small Sample Tabular Biomedical Data

An Adaptive Event-based Data Converter for Always-on Biomedical Applications at the Edge

Hardness-guided domain adaptation to recognise biomedical named entities under low-resource scenarios

Biomedical Multi-hop Question Answering Using Knowledge Graph Embeddings and Language Models

Predicting the clinical citation count of biomedical papers using multilayer perceptron neural network

Extracting Biomedical Factual Knowledge Using Pretrained Language Model and Electronic Health Record Context