Physically Aware Radiomics Without Interpolation: Disentangling Voxel Geometry and Signal Modification in CT and MRI
无插值的物理感知放射组学:解析CT和MRI中的体素几何与信号修正
David Corral Fontecha, Juan Miranda Bautista, Pablo Menendez Fernández-Miranda, Sergio Rubio-Martín, Lara Lloret Iglesias, Jose A. Vega
机构
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Complejo Asistencial Universitario de León(莱昂大学附属医院综合体)
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Hospital Universitario Rey Juan Carlos(雷·胡安·卡洛斯大学医院)
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Health Research Institute of the Jiménez Díaz Foundation(希门尼斯·迪亚斯基金会健康研究所)
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Rey Juan Carlos University(雷·胡安·卡洛斯大学)
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Universidad de Oviedo(奥维耶多大学)
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Universidad de León(莱昂大学)
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IFCA-CSIC(西班牙国家研究委员会高级计算与电子科学研究所)
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Universidad Autónoma de Chile(智利大学)
SpikeDS: Dual Sparsity Spikformer for Perineural Invasion Prediction in 3D MRI
SpikeDS:用于3D MRI中神经周围侵犯预测的双稀疏Spikformer
Induk Um, Youngung Han, Kyeonghun Kim, Yului Jeong, Jina Jeong, Hyunsu Go, Dohyun Kweon, Sungha Park, Junga Kim, Anna Jung, Suah Park, Hyuk-Jae Lee, Pa Hong, Woo Kyoung Jeong, Won Jae Lee, Ken Ying-Kai Liao, Nam-Joon Kim
Anatomy-Privileged Distillation with Token Routing for MRI-Based Prediction of Perineural Invasion
基于令牌路由的解剖学特权蒸馏用于基于MRI的神经周围侵犯预测
Hyunsu Go, Youngung Han, Kyeonghun Kim, Junga Kim, Dohyun Kweon, Jinyong Jun, Sungha Park, Anna Jung, Induk Um, Yului Jeong, Suah Park, Jina Jeong, Pa Hong, Woo Kyoung Jeong, Won Jae Lee, Ken Ying-Kai Liao, Hyuk-Jae Lee, Nam-Joon Kim
The TopCoW Challenge -- Topology-Aware Circle of Willis Segmentation for CT and MR Angiography
TopCoW挑战——用于CT和MR血管造影的拓扑感知Willis环分割
Kaiyuan Yang, Fabio Musio, Yihui Ma, Norman Juchler, Johannes C. Paetzold, Rami Al-Maskari, Luciano Höher, Hongwei Bran Li, Ibrahim Ethem Hamamci, Anjany Sekuboyina, Suprosanna Shit, Houjing Huang, Chinmay Prabhakar, Ezequiel de la Rosa, Bastian Wittmann, Diana Waldmannstetter, Florian Kofler, Fernando Navarro, Martin J. Menten, Ivan Ezhov, Daniel Rueckert, Iris N. Vos, Ynte M. Ruigrok, Birgitta K. Velthuis, Hugo J. Kuijf, Pengcheng Shi, Wei Liu, Ting Ma, Maximilian R. Rokuss, Yannick Kirchhoff, Fabian Isensee, Klaus Maier-Hein, Chengcheng Zhu, Huilin Zhao, Philippe Bijlenga, Julien Hämmerli, Catherine Wurster, Laura Westphal, Jeroen Bisschop, Elisa Colombo, Hakim Baazaoui, Hannah-Lea Handelsmann, Andrew Makmur, James Hallinan, Amrish Soundararajan, Benedikt Wiestler, Jan S. Kirschke, Evamaria O. Riedel, Roland Wiest, Emmanuel Montagnon, Laurent Letourneau-Guillon, Kwanseok Oh, Dahye Lee, Orhun Utku Aydin, Adam Hilbert, Jana Rieger, Dimitrios Rallios, Satoru Tanioka, Alexander Koch, Dietmar Frey, Abdul Qayyum, Moona Mazher, Steven Niederer, Nico Disch, Julius C. Holzschuh, Dominic LaBella, Francesco Galati, Daniele Falcetta, Maria A. Zuluaga, Chaolong Lin, Haoran Zhao, Zehan Zhang, Minghui Zhang, Xin You, Hanxiao Zhang, Guang-Zhong Yang, Yun Gu, Sinyoung Ra, Jongyun Hwang, Hyunjin Park, Junqiang Chen, Marek Wodzinski, Henning Müller, Nesrin Mansouri, Florent Autrusseau, Cansu Yalcin, Rachika E. Hamadache, Clara Lisazo, Joaquim Salvi, Adrià Casamitjana, Xavier Lladó, Uma Maria Lal-Trehan Estrada, Valeriia Abramova, Luca Giancardo, Arnau Oliver, Paula Casademunt, Adrian Galdran, Matteo Delucchi, Oscar Camara, Jialu Liu, Haibin Huang, Yue Cui, Zehang Lin, Yusheng Liu, Shunzhi Zhu, Tatsat R. Patel, Adnan H. Siddiqui, Vincent M. Tutino, Maysam Orouskhani, Huayu Wang, Mahmud Mossa-Basha, Yuki Sato, Sven Hirsch, Susanne Wegener, Bjoern Menze
机构
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Department of Quantitative Biomedicine, University of Zurich, Zurich, Switzerland
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Institute of Computational Life Sciences, Zurich University of Applied Sciences (ZHAW), Waedenswil, Switzerland
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Department of Neuroradiology, University Hospital of Zurich, Zurich, Switzerland
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Department of Neurosurgery, Zhongnan Hospital of Wuhan University, Wuhan, China
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Department of Radiology at Weill Cornell Medicine, Cornell University, New York, USA
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Institute for Tissue Engineering
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School of Computation, Information
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Technology, Technical University of Munich, Germany
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Athinoula A. Martinos Center for Biomedical Imaging, Harvard Medical School, Boston, USA
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School of Medicine
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Health, TUM Klinikum, Technical University of Munich, Germany
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Munich Center for Machine Learning, Munich, Germany
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Department of Computing, Imperial College London, London, UK
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Image Sciences Institute, UMC Utrecht, Utrecht, The Netherlands
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Department of Neurology
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Neurosurgery, University Medical Center Utrecht, Utrecht, The Netherlands
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Department of Radiology, University Medical Center Utrecht, Utrecht, The Netherlands
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Electronic \& Information Engineering School, Harbin Institute of Technology (Shenzhen), China
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Peng Cheng Laboratory, Shenzhen, China
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Division of Medical Image Computing, German Cancer Research Center (DKFZ), Heidelberg, Germany
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Faculty of Mathematics
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Computer Science, Heidelberg University, Germany
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Helmholtz Imaging, German Cancer Research Center, Heidelberg, Germany
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Data Science School for Health, Karlsruhe/Heidelberg, Germany
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Learning Group, Department of Radiation Oncology, Heidelberg University Hospital
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Department of Radiology, University of Washington, Seattle, WA, USA
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Department of Radiology, Ren Ji Hospital, Shanghai Jiao Tong University School of Medicine, Shanghai, China
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Department of Clinical Neurosciences, Division of Neurosurgery, Geneva University Hospitals, Geneva, Switzerland
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Department of Neurology, University Hospital of Zurich, Zurich, Switzerland
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Department of Physiology, University of Toronto, Canada
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Department of Neurosurgery, University Hospital of Zurich, Zurich, Switzerland
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Department of Diagnostic Imaging, National University Hospital, Singapore
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University of Chicago, USA
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Department of Diagnostic
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Interventional Neuroradiology, University Hospital Berne
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University of Berne, Berne, Switzerland
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Centre de Recherche du Centre Hospitalier de l’Université de Montréal (CRCHUM), Montréal, Québec, Canada
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DEEPNOID Inc., Seoul, South Korea
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Department of Artificial Intelligence, Korea University, Seoul, South Korea
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Charité Lab for AI in Medicine (CLAIM), Charité Universitätsmedizin Berlin, Berlin, Germany
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Lung Institute, Faculty of Medicine, Imperial College London, London, UK
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Centre for Medical Image Computing, Department of Computer Science, University College London, London, UK
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Department of Radiation Oncology, Duke University Medical Center, Durham, NC, USA
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Institute of Medical Technology, Peking University Health Science Center, Beijing, China
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Hangzhou Genlight MedTech Co., Ltd., China
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Institute of Medical Robotics, Shanghai Jiao Tong University, Shanghai, China
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Department of Automation, Shanghai Jiao Tong University, Shanghai, China
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Department of Artificial Intelligence, Sungkyunkwan University, Seoul, South Korea
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Department of Electrical
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Computer Engineering, Sungkyunkwan University, Seoul, South Korea
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Shanghai MediWorks Precision Instruments Co., Ltd., China
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Institute of Informatics, HES-SO Valais-Wallis, Switzerland
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Department of Measurement
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Electronics, AGH University of Krakow, Poland
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Laboratoire de Thermique et Energie de Nantes (LTeN), Université Nantes, Polytech’Nantes, Nantes, France
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Research Institute of Computer Vision
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Center for Precision Health, McWilliams School of Biomedical Informatics, University of Texas Health Science Center at Houston, USA
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Physense, BCN-Medtech, Department of Communication
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Information Technologies, Universitat Pompeu Fabra, Barcelona, Spain
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Department of Mathematical Modeling
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Machine Learning, University of Zurich, Zurich, Switzerland
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Laboratory of Brain Atlas
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Brain-inspired Intelligence, Institute of Automation, Chinese Academy of Sciences, Beijing, China
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School of Artificial Intelligence, University of Chinese Academy of Sciences, Beijing, China
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School of Computer
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Information Engineering, Xiamen University of Technology, Xiamen, China
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Vascular Research Center, University at Buffalo, NY, USA
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Department of Pathology
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Anatomical Sciences, University at Buffalo, NY, USA
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Department of Neurosurgery, University at Buffalo, NY, USA
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LPIXEL Inc., Tokyo, Japan
CommentsSummary paper for the TopCoW Challenge: 4 figures, 1 table, and supplementary material in appendix. Accepted for publication in NEJM AI. Datasets and best-performing algorithm Dockers are available at https://zenodo.org/records/15692630 and https://zenodo.org/records/15665435
Comments15 pages, 4 figures. Keywords: medical image segmentation, curvature regularization, loss function, active contour model, mean curvature, deep learning. Under review at Biomedical Signal Processing and Control
UniMedSeg: Unified In-Context Learning for Multi-Paradigm 2D/3D Medical Image Segmentation
UniMedSeg:用于多范式2D/3D医学图像分割的统一上下文学习
Yunzhou Li, Jiesi Hu, Yanwu Yang, Hanyang Peng, Chenfei Ye, Jianfeng Cao, Yixuan Yuan, Ting Ma
机构
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Harbin Institute of Technology at Shenzhen(哈尔滨工业大学(深圳))
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Peng Cheng Laboratory(鹏城实验室)
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University Hospital Tübingen(图宾根大学医院)
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German Center for Mental Health(德国心理健康中心)
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Chinese University of Hong Kong(香港中文大学)