2602.17162
2026-05-26
cs.AI
q-bio.GN
JEPA-DNA: Grounding Genomic Foundation Models through Joint-Embedding Predictive Architectures
JEPA-DNA:通过联合嵌入预测架构夯实基因组基础模型
Ariel Larey, Elay Dahan, Amit Bleiweiss, Raizy Kellerman, Guy Leib, Omri Nayshool, Dan Ofer, Tal Zinger, Dan Dominissini, Gideon Rechavi, Nicole Bussola, Simon Lee, Shane O'Connell, Dung Hoang, Marissa Wirth, Alexander W. Charney, Nati Daniel, Yoli Shavit
AI总结
提出JEPA-DNA框架,将联合嵌入预测架构与生成式目标结合,通过潜在空间监督全局序列嵌入,实现从令牌恢复到语义对齐的转变,在17项基因组基准任务上提升线性探测和零样本性能,达到新最优。