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2508.11936 2026-02-23 cs.LG

M3OOD: Automatic Selection of Multimodal OOD Detectors

Yuehan Qin, Li Li, Defu Cao, Tiankai Yang, Jiate Li, Yue Zhao

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Out-of-distribution (OOD) robustness is a critical challenge for modern machine learning systems, particularly as they increasingly operate in multimodal settings involving inputs like video, audio, and sensor data. Currently, many OOD detection methods have been proposed, each with different designs targeting various distribution shifts. A single OOD detector may not prevail across all the scenarios; therefore, how can we automatically select an ideal OOD detection model for different distribution shifts? Due to the inherent unsupervised nature of the OOD detection task, it is difficult to predict model performance and find a universally Best model. Also, systematically comparing models on the new unseen data is costly or even impractical. To address this challenge, we introduce M3OOD, a meta-learning-based framework for OOD detector selection in multimodal settings. Meta learning offers a solution by learning from historical model behaviors, enabling rapid adaptation to new data distribution shifts with minimal supervision. Our approach combines multimodal embeddings with handcrafted meta-features that capture distributional and cross-modal characteristics to represent datasets. By leveraging historical performance across diverse multimodal benchmarks, M3OOD can recommend suitable detectors for a new data distribution shift. Experimental evaluation demonstrates that M3OOD consistently outperforms 10 competitive baselines across 12 test scenarios with minimal computational overhead.

2508.04581 2026-02-23 cs.CL cs.AI cs.LG

Share Your Attention: Transformer Weight Sharing via Matrix-based Dictionary Learning

Magauiya Zhussip, Dmitriy Shopkhoev, Ammar Ali, Stamatios Lefkimmiatis

Comments This work has been accepted and presented at AAAI 2026 in Singapore

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Large language models have revolutionized AI applications, yet their high computational and memory demands hinder their widespread deployment. Existing compression techniques focus on intra-block optimizations (e.g., low-rank approximation or attention pruning), while the repetitive layered structure of transformers implies significant inter-block redundancy - a dimension largely unexplored beyond key-value (KV) caching. Inspired by dictionary learning in convolutional networks, we propose a framework for structured weight sharing across transformer layers. Our approach decomposes attention projection matrices (Q, K, V, O) into shared dictionary atoms, reducing the attention module's parameters by 66.7\% while achieving on-par performance. Unlike complex methods requiring distillation or architectural changes, MASA (Matrix Atom Sharing in Attention) operates as a drop-in replacement-trained with standard optimizers - and represents each layer's weights as linear combinations of shared matrix atoms. Experiments across scales (100M-700M parameters) show that MASA achieves better benchmark accuracy and perplexity than GQA, low-rank baselines and recent Repeat-all-over/Sequential sharing at comparable parameter budgets. Ablation studies confirm robustness to the dictionary size and the efficacy of shared representations in capturing cross-layer statistical regularities. Extending to Vision Transformers (ViT), MASA matches performance metrics on image classification tasks with 66.7\% fewer attention parameters. By combining dictionary learning strategies with transformer efficiency, MASA offers a scalable blueprint for parameter-efficient models without sacrificing performance. Finally, we investigate the possibility of employing MASA on large pretrained models to reduce their number of parameters without experiencing any significant drop in their performance.

2508.03923 2026-02-23 cs.CL

CoAct-1: Computer-using Multi-Agent System with Coding Actions

Linxin Song, Yutong Dai, Viraj Prabhu, Jieyu Zhang, Taiwei Shi, Li Li, Junnan Li, Silvio Savarese, Zeyuan Chen, Jieyu Zhao, Ran Xu, Caiming Xiong

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Autonomous agents that operate computers via Graphical User Interfaces (GUIs) often struggle with efficiency and reliability on complex, long-horizon tasks. While augmenting these agents with planners can improve task decomposition, they remain constrained by the inherent limitations of performing all actions through GUI manipulation, leading to brittleness and inefficiency. In this work, we introduce a more robust and flexible paradigm: enabling agents to use coding as a enhanced action. We present CoAct-1, a novel multi-agent system that synergistically combines GUI-based control with direct programmatic execution. CoAct-1 features an Orchestrator that dynamically delegates subtasks to either a conventional GUI Operator or a specialized Programmer agent, which can write and execute Python or Bash scripts. This hybrid approach allows the agent to bypass inefficient GUI action sequences for tasks like file management and data processing, while still leveraging visual interaction when necessary. We evaluate our system on the challenging OSWorld benchmark, where CoAct-1 achieves a new state-of-the-art success rate of 60.76%, significantly outperforming prior methods. Furthermore, our approach dramatically improves efficiency, reducing the average number of steps required to complete a task to just 10.15, compared to 15 for leading GUI agents. Our results demonstrate that integrating coding as a core action provides a more powerful, efficient, and scalable path toward generalized computer automation.

2507.18031 2026-02-23 cs.CV cs.AI cs.LG

ViGText: Deepfake Image Detection with Vision-Language Model Explanations and Graph Neural Networks

Ahmad ALBarqawi, Mahmoud Nazzal, Issa Khalil, Abdallah Khreishah, NhatHai Phan

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The rapid rise of deepfake technology, which produces realistic but fraudulent digital content, threatens the authenticity of media. Traditional deepfake detection approaches often struggle with sophisticated, customized deepfakes, especially in terms of generalization and robustness against malicious attacks. This paper introduces ViGText, a novel approach that integrates images with Vision Large Language Model (VLLM) Text explanations within a Graph-based framework to improve deepfake detection. The novelty of ViGText lies in its integration of detailed explanations with visual data, as it provides a more context-aware analysis than captions, which often lack specificity and fail to reveal subtle inconsistencies. ViGText systematically divides images into patches, constructs image and text graphs, and integrates them for analysis using Graph Neural Networks (GNNs) to identify deepfakes. Through the use of multi-level feature extraction across spatial and frequency domains, ViGText captures details that enhance its robustness and accuracy to detect sophisticated deepfakes. Extensive experiments demonstrate that ViGText significantly enhances generalization and achieves a notable performance boost when it detects user-customized deepfakes. Specifically, average F1 scores rise from 72.45% to 98.32% under generalization evaluation, and reflects the model's superior ability to generalize to unseen, fine-tuned variations of stable diffusion models. As for robustness, ViGText achieves an increase of 11.1% in recall compared to other deepfake detection approaches. When facing targeted attacks that exploit its graph-based architecture, ViGText limits classification performance degradation to less than 4%. ViGText uses detailed visual and textual analysis to set a new standard for detecting deepfakes, helping ensure media authenticity and information integrity.

2507.10587 2026-02-23 cs.CL cs.AI

Anthropomimetic Uncertainty: What Verbalized Uncertainty in Language Models is Missing

Dennis Ulmer, Alexandra Lorson, Ivan Titov, Christian Hardmeier

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Human users increasingly communicate with large language models (LLMs), but LLMs suffer from frequent overconfidence in their output, even when its accuracy is questionable, which undermines their trustworthiness and perceived legitimacy. Therefore, there is a need for language models to signal their confidence in order to reap the benefits of human-machine collaboration and mitigate potential harms. Verbalized uncertainty is the expression of confidence with linguistic means, an approach that integrates perfectly into language-based interfaces. Most recent research in natural language processing (NLP) overlooks the nuances surrounding human uncertainty communication and the biases that influence the communication of and with machines. We argue for anthropomimetic uncertainty, the principle that intuitive and trustworthy uncertainty communication requires a degree of imitation of human linguistic behaviors. We present a thorough overview of the research in human uncertainty communication, survey ongoing research in NLP, and perform additional analyses to demonstrate so-far underexplored biases in verbalized uncertainty. We conclude by pointing out unique factors in human-machine uncertainty and outlining future research directions towards implementing anthropomimetic uncertainty.

2507.10134 2026-02-23 cs.AI

FRSICL: LLM-Enabled In-Context Learning Flight Resource Allocation for Fresh Data Collection in UAV-Assisted Wildfire Monitoring

Yousef Emami, Hao Zhou, Miguel Gutierrez Gaitan, Kai Li, Luis Almeida

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Uncrewed Aerial Vehicles (UAVs) play a vital role in public safety, especially in monitoring wildfires, where early detection reduces environmental impact. In UAV-Assisted Wildfire Monitoring (UAWM) systems, jointly optimizing the data collection schedule and UAV velocity is essential to minimize the average Age of Information (AoI) for sensory data. Deep Reinforcement Learning (DRL) has been used for this optimization, but its limitations-including low sampling efficiency, discrepancies between simulation and real-world conditions, and complex training make it unsuitable for time-critical applications such as wildfire monitoring. Recent advances in Large Language Models (LLMs) provide a promising alternative. With strong reasoning and generalization capabilities, LLMs can adapt to new tasks through In-Context Learning (ICL), which enables task adaptation using natural language prompts and example-based guidance without retraining. This paper proposes a novel online Flight Resource Allocation scheme based on LLM-Enabled In-Context Learning (FRSICL) to jointly optimize the data collection schedule and UAV velocity along the trajectory in real time, thereby asymptotically minimizing the average AoI across all ground sensors. Unlike DRL, FRSICL generates data collection schedules and velocities using natural language task descriptions and feedback from the environment, enabling dynamic decision-making without extensive retraining. Simulation results confirm the effectiveness of FRSICL compared to state-of-the-art baselines, namely Proximal Policy Optimization, Block Coordinate Descent, and Nearest Neighbor.

2507.09650 2026-02-23 cs.LG

Cultivating Pluralism In Algorithmic Monoculture: The Community Alignment Dataset

Lily Hong Zhang, Smitha Milli, Karen Jusko, Jonathan Smith, Brandon Amos, Wassim Bouaziz, Manon Revel, Jack Kussman, Yasha Sheynin, Lisa Titus, Bhaktipriya Radharapu, Jane Yu, Vidya Sarma, Kris Rose, Maximilian Nickel

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How can large language models (LLMs) serve users with varying preferences that may conflict across cultural, political, or other dimensions? To advance this challenge, this paper establishes four key results. First, we demonstrate, through a large-scale multilingual human study with representative samples from five countries (N=15,000), that humans exhibit substantially more variation in preferences than the responses of 21 state-of-the-art LLMs. Second, we show that existing methods for preference dataset collection are insufficient for learning the diversity of human preferences even along two of the most salient dimensions of variability in global values, due to the underlying homogeneity of candidate responses. Third, we argue that this motivates the need for negatively-correlated sampling when generating candidate sets, and we show that simple prompt-based techniques for doing so greatly enhance the performance of alignment methods in learning heterogeneous preferences. Fourth, based on this novel candidate sampling approach, we collect and open-source Community Alignment} the largest and most representative multilingual and multi-turn preference dataset to date, featuring 233,319 comparisons from annotators spanning five countries. Overall, we hope that the Community Alignment dataset will be a valuable resource for improving the effectiveness of LLMs for a diverse global population.

2507.09043 2026-02-23 cs.LG stat.ML

GAGA: Gaussianity-Aware Gaussian Approximation for Efficient 3D Molecular Generation

Jingxiang Qu, Wenhan Gao, Ruichen Xu, Yi Liu

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Gaussian Probability Path based Generative Models (GPPGMs) generate data by reversing a stochastic process that progressively corrupts samples with Gaussian noise. Despite state-of-the-art results in 3D molecular generation, their deployment is hindered by the high cost of long generative trajectories, often requiring hundreds to thousands of steps during training and sampling. In this work, we propose a principled method, named GAGA, to improve generation efficiency without sacrificing training granularity or inference fidelity of GPPGMs. Our key insight is that different data modalities obtain sufficient Gaussianity at markedly different steps during the forward process. Based on this observation, we analytically identify a characteristic step at which molecular data attains sufficient Gaussianity, after which the trajectory can be replaced by a closed-form Gaussian approximation. Unlike existing accelerators that coarsen or reformulate trajectories, our approach preserves full-resolution learning dynamics while avoiding redundant transport through truncated distributional states. Experiments on 3D molecular generation benchmarks demonstrate that our GAGA achieves substantial improvement on both generation quality and computational efficiency.

2507.00319 2026-02-23 cs.RO

When Digital Twins Meet Large Language Models: Realistic, Interactive, and Editable Simulation for Autonomous Driving

Tanmay Vilas Samak, Chinmay Vilas Samak, Bing Li, Venkat Krovi

Comments Accepted in IEEE Robotics & Automation Magazine (RAM)

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Simulation frameworks have been key enablers for the development and validation of autonomous driving systems. However, existing methods struggle to comprehensively address the autonomy-oriented requirements of balancing: (i) dynamical fidelity, (ii) photorealistic rendering, (iii) context-relevant scenario orchestration, and (iv) real-time performance. To address these limitations, we present a unified framework for creating and curating high-fidelity digital twins to accelerate advancements in autonomous driving research. Our framework leverages a mix of physics-based and data-driven techniques for developing and simulating digital twins of autonomous vehicles and their operating environments. It is capable of reconstructing real-world scenes and assets with geometric and photorealistic accuracy (~97% structural similarity) and infusing them with physical properties to enable real-time (>60 Hz) dynamical simulation of the ensuing driving scenarios. Additionally, it incorporates a large language model (LLM) interface to flexibly edit the driving scenarios online via natural language prompts, with ~85% generalizability and ~95% repeatability. Finally, an optional vision language model (VLM) provides ~80% visual enhancement by blending the hybrid scene composition.

2506.23339 2026-02-23 cs.LG cs.AI physics.chem-ph q-bio.QM

VALID-Mol: a Systematic Framework for Validated LLM-Assisted Molecular Design

Malikussaid, Hilal Hudan Nuha, Isman Kurniawan

Comments 6 pages, 1 figure, 1 algorithm, 5 tables, to be published in ISPACS 2025, unabridged version exists as arXiv:2506.23339v1

Journal ref Proc. 2025 Int. Symp. on Intell. Signal Process. and Commun. Syst. (ISPACS), 2025, pp. 1-6

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Large Language Models demonstrate substantial promise for advancing scientific discovery, yet their deployment in disciplines demanding factual precision and specialized domain constraints presents significant challenges. Within molecular design for pharmaceutical development, these models can propose innovative molecular modifications but frequently generate chemically infeasible structures. We introduce VALID-Mol, a comprehensive framework that integrates chemical validation with LLM-driven molecular design, achieving an improvement in valid chemical structure generation from 3% to 83%. Our methodology synthesizes systematic prompt optimization, automated chemical verification, and domain-adapted fine-tuning to ensure dependable generation of synthesizable molecules with enhanced properties. Our contribution extends beyond implementation details to provide a transferable methodology for scientifically-constrained LLM applications with measurable reliability enhancements. Computational analyses indicate our framework generates promising synthesis candidates with up to 17-fold predicted improvements in target binding affinity while preserving synthetic feasibility.

2506.22095 2026-02-23 cs.LG cs.AI

Beyond Simple Graphs: Neural Multi-Objective Routing on Multigraphs

Filip Rydin, Attila Lischka, Jiaming Wu, Morteza Haghir Chehreghani, Balázs Kulcsár

Comments Accepted by ICLR 2026, Final Camera-Ready Version. 34 pages, 6 Figures

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Learning-based methods for routing have gained significant attention in recent years, both in single-objective and multi-objective contexts. Yet, existing methods are unsuitable for routing on multigraphs, which feature multiple edges with distinct attributes between node pairs, despite their strong relevance in real-world scenarios. In this paper, we propose two graph neural network-based methods to address multi-objective routing on multigraphs. Our first approach operates directly on the multigraph by autoregressively selecting edges until a tour is completed. The second model, which is more scalable, first simplifies the multigraph via a learned pruning strategy and then performs autoregressive routing on the resulting simple graph. We evaluate both models empirically, across a wide range of problems and graph distributions, and demonstrate their competitive performance compared to strong heuristics and neural baselines.

2506.15408 2026-02-23 cs.LG cs.AI

Unifying VXAI: A Systematic Review and Framework for the Evaluation of Explainable AI

David Dembinsky, Adriano Lucieri, Stanislav Frolov, Hiba Najjar, Ko Watanabe, Andreas Dengel

Comments Published at TMLR

Journal ref Transactions on Machine Learning Research (2026), ISSN 2835-8856

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Modern AI systems frequently rely on opaque black-box models, most notably Deep Neural Networks, whose performance stems from complex architectures with millions of learned parameters. While powerful, their complexity poses a major challenge to trustworthiness, particularly due to a lack of transparency. Explainable AI (XAI) addresses this issue by providing human-understandable explanations of model behavior. However, to ensure their usefulness and trustworthiness, such explanations must be rigorously evaluated. Despite the growing number of XAI methods, the field lacks standardized evaluation protocols and consensus on appropriate metrics. To address this gap, we conduct a systematic literature review following the Preferred Reporting Items for Systematic Reviews and Meta-Analyses (PRISMA) guidelines and introduce a unified framework for the eValuation of XAI (VXAI). We identify 362 relevant publications and aggregate their contributions into 41 functionally similar metric groups. In addition, we propose a three-dimensional categorization scheme spanning explanation type, evaluation contextuality, and explanation quality desiderata. Our framework provides the most comprehensive and structured overview of VXAI to date. It supports systematic metric selection, promotes comparability across methods, and offers a flexible foundation for future extensions.

2506.14825 2026-02-23 cs.CV cs.AI

GraphGSOcc: Semantic-Geometric Graph Transformer with Dynamic-Static Decoupling for 3D Gaussian Splatting-based Occupancy Prediction

Ke Song, Yunhe Wu, Chunchit Siu, Huiyuan Xiong

Journal ref IEEE Transactions on Circuits and Systems for Video Technology 2026

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Addressing the task of 3D semantic occupancy prediction for autonomous driving, we tackle two key issues in existing 3D Gaussian Splatting (3DGS) methods: (1) unified feature aggregation neglecting semantic correlations among similar categories and across regions, (2) boundary ambiguities caused by the lack of geometric constraints in MLP iterative optimization and (3) biased issues in dynamic-static object coupling optimization. We propose the GraphGSOcc model, a novel framework that combines semantic and geometric graph Transformer and decouples dynamic-static objects optimization for 3D Gaussian Splatting-based Occupancy Prediction. We propose the Dual Gaussians Graph Attenntion, which dynamically constructs dual graph structures: a geometric graph adaptively calculating KNN search radii based on Gaussian poses, enabling large-scale Gaussians to aggregate features from broader neighborhoods while compact Gaussians focus on local geometric consistency; a semantic graph retaining top-M highly correlated nodes via cosine similarity to explicitly encode semantic relationships within and across instances. Coupled with the Multi-scale Graph Attention framework, fine-grained attention at lower layers optimizes boundary details, while coarsegrained attention at higher layers models object-level topology. On the other hand, we decouple dynamic and static objects by leveraging semantic probability distributions and design a Dynamic-Static Decoupled Gaussian Attention mechanism to optimize the prediction performance for both dynamic objects and static scenes. GraphGSOcc achieves state-ofthe-art performance on the SurroundOcc-nuScenes, Occ3D-nuScenes, OpenOcc and KITTI occupancy benchmarks. Experiments on the SurroundOcc dataset achieve an mIoU of 25.20%, reducing GPU memory to 6.8 GB, demonstrating a 1.97% mIoU improvement and 13.7% memory reduction compared to GaussianWorld.

2506.14457 2026-02-23 cs.LG

Dataset distillation for memorized data: Soft labels can leak held-out teacher knowledge

Freya Behrens, Lenka Zdeborová

Comments 9 pages, 21 figures

Journal ref ICLR 2026

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Dataset distillation aims to compress training data into fewer examples via a teacher, from which a student can learn effectively. While its success is often attributed to structure in the data, modern neural networks also memorize specific facts, but if and how such memorized information is can transferred in distillation settings remains less understood. In this work, we show that students trained on soft labels from teachers can achieve non-trivial accuracy on held-out memorized data they never directly observed. This effect persists on structured data when the teacher has not generalized.To analyze it in isolation, we consider finite random i.i.d. datasets where generalization is a priori impossible and a successful teacher fit implies pure memorization. Still, students can learn non-trivial information about the held-out data, in some cases up to perfect accuracy. In those settings, enough soft labels are available to recover the teacher functionally - the student matches the teacher's predictions on all possible inputs, including the held-out memorized data. We show that these phenomena strongly depend on the temperature with which the logits are smoothed, but persist across varying network capacities, architectures and dataset compositions.

2506.08364 2026-02-23 cs.CL

Structure-Augmented Reasoning Generation

Jash Rajesh Parekh, Pengcheng Jiang, Jiawei Han

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Recent advances in Large Language Models (LLMs) have significantly improved complex reasoning capabilities. Retrieval-Augmented Generation (RAG) has further extended these capabilities by grounding generation in dynamically retrieved evidence, enabling access to information beyond the model's training parameters. However, while RAG addresses knowledge availability, standard pipelines treat retrieved documents as independent, unstructured text chunks, forcing models to implicitly connect information across fragmented context. This limitation becomes critical for multi-hop queries, where answering correctly requires synthesizing information scattered across different documents. We present Structure-Augmented Reasoning Generation (SARG), a post-retrieval framework that addresses this gap by materializing explicit reasoning structures from retrieved context. SARG operates in three stages: extracting relational triples from retrieved documents via few-shot prompting, organizing these triples into a domain-adaptive knowledge graph, and performing multi-hop traversal to identify relevant reasoning chains. These chains, along with their associated text chunks, are then integrated into the generation prompt to explicitly guide the model's reasoning process. Importantly, SARG doesn't require custom retrievers or domain-specific fine-tuning. Instead, it functions as a modular layer compatible with all existing RAG pipelines. Extensive experiments on open-domain QA benchmarks and specialized reasoning datasets in finance and medicine demonstrate that SARG significantly outperforms state-of-the-art flat-context RAG baselines in both factual accuracy and reasoning coherence. Furthermore, by surfacing the exact traversal paths used during generation, SARG provides fully traceable and interpretable inference.

2505.20674 2026-02-23 cs.CL cs.AI

PonderLM: Pretraining Language Models to Ponder in Continuous Space

Boyi Zeng, Shixiang Song, Siyuan Huang, Yixuan Wang, He Li, Ziwei He, Xinbing Wang, Zhiyu Li, Zhouhan Lin

Comments ICLR 2026

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Humans ponder before articulating complex sentence elements, enabling deeper cognitive processing through focused effort. In this work, we introduce this pondering process into language models by repeatedly invoking the forward process within a single token generation step. During pondering, instead of generating an actual token sampled from the prediction distribution, the model ponders by yielding a weighted sum of all token embeddings according to the predicted token distribution. The generated embedding is then fed back as input for another forward pass. We show that the model can learn to ponder in this way through self-supervised learning, without any human annotations. Experiments across three widely used open-source architectures-GPT-2, Pythia, and LLaMA-and extensive downstream task evaluations demonstrate the effectiveness and generality of our method. On 9 downstream benchmarks, our pondering-enhanced Pythia models significantly outperform the official Pythia models. Notably, our PonderPythia models demonstrate remarkable effectiveness: PonderPythia-2.8B surpasses Pythia-6.9B and rivals Pythia-12B, while our PonderPythia-1B matches TinyLlama-1.1B, a model trained on 10 times more data. The code is available at https://github.com/LUMIA-Group/PonderingLM.

2505.18612 2026-02-23 cs.CV

Mod-Adapter: Tuning-Free and Versatile Multi-concept Personalization via Modulation Adapter

Weizhi Zhong, Huan Yang, Zheng Liu, Huiguo He, Zijian He, Xuesong Niu, Di Zhang, Guanbin Li

Comments Accepted by ICLR 2026, project page: https://weizhi-zhong.github.io/Mod-Adapter

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Personalized text-to-image generation aims to synthesize images of user-provided concepts in diverse contexts. Despite recent progress in multi-concept personalization, most are limited to object concepts and struggle to customize abstract concepts (e.g., pose, lighting). Some methods have begun exploring multi-concept personalization supporting abstract concepts, but they require test-time fine-tuning for each new concept, which is time-consuming and prone to overfitting on limited training images. In this work, we propose a novel tuning-free method for multi-concept personalization that can effectively customize both object and abstract concepts without test-time fine-tuning. Our method builds upon the modulation mechanism in pre-trained Diffusion Transformers (DiTs) model, leveraging the localized and semantically meaningful properties of the modulation space. Specifically, we propose a novel module, Mod-Adapter, to predict concept-specific modulation direction for the modulation process of concept-related text tokens. It introduces vision-language cross-attention for extracting concept visual features, and Mixture-of-Experts (MoE) layers that adaptively map the concept features into the modulation space. Furthermore, to mitigate the training difficulty caused by the large gap between the concept image space and the modulation space, we introduce a VLM-guided pre-training strategy that leverages the strong image understanding capabilities of vision-language models to provide semantic supervision signals. For a comprehensive comparison, we extend a standard benchmark by incorporating abstract concepts. Our method achieves state-of-the-art performance in multi-concept personalization, supported by quantitative, qualitative, and human evaluations.

2505.18150 2026-02-23 cs.LG q-bio.QM stat.ML

Generative Distribution Embeddings: Lifting autoencoders to the space of distributions for multiscale representation learning

Nic Fishman, Gokul Gowri, Peng Yin, Jonathan Gootenberg, Omar Abudayyeh

Comments NeurIPS 2025

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Many real-world problems require reasoning across multiple scales, demanding models which operate not on single data points, but on entire distributions. We introduce generative distribution embeddings (GDE), a framework that lifts autoencoders to the space of distributions. In GDEs, an encoder acts on sets of samples, and the decoder is replaced by a generator which aims to match the input distribution. This framework enables learning representations of distributions by coupling conditional generative models with encoder networks which satisfy a criterion we call distributional invariance. We show that GDEs learn predictive sufficient statistics embedded in the Wasserstein space, such that latent GDE distances approximately recover the $W_2$ distance, and latent interpolation approximately recovers optimal transport trajectories for Gaussian and Gaussian mixture distributions. We systematically benchmark GDEs against existing approaches on synthetic datasets, demonstrating consistently stronger performance. We then apply GDEs to six key problems in computational biology: learning donor-level representations from single-nuclei RNA sequencing data (6M cells), capturing clonal dynamics in lineage-traced RNA sequencing data (150K cells), predicting perturbation effects on transcriptomes (1M cells), predicting perturbation effects on cellular phenotypes (20M single-cell images), designing synthetic yeast promoters (34M sequences), and spatiotemporal modeling of viral protein sequences (1M sequences).

2505.17748 2026-02-23 cs.LG cs.CV

Soft-CAM: Making black box models self-explainable for medical image analysis

Kerol Djoumessi, Philipp Berens

Comments Accepted at the Medical Imaging with Deep Learning Conference (MIDL 2026)

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Convolutional neural networks (CNNs) are widely used for high-stakes applications like medicine, often surpassing human performance. However, most explanation methods rely on post-hoc attribution, approximating the decision-making process of already trained black-box models. These methods are often sensitive, unreliable, and fail to reflect true model reasoning, limiting their trustworthiness in critical applications. In this work, we introduce SoftCAM, a straightforward yet effective approach that makes standard CNN architectures inherently interpretable. By removing the global average pooling layer and replacing the fully connected classification layer with a convolution-based class evidence layer, SoftCAM preserves spatial information and produces explicit class activation maps that form the basis of the model's predictions. Evaluated on three medical datasets, SoftCAM maintains classification performance while significantly improving both the qualitative and quantitative explanation compared to existing post-hoc methods. Our results demonstrate that CNNs can be inherently interpretable without compromising performance, advancing the development of self-explainable deep learning for high-stakes decision-making. The code is available at https://github.com/kdjoumessi/SoftCAM

2505.17064 2026-02-23 cs.CV cs.AI cs.LG

Synthetic History: Evaluating Visual Representations of the Past in Diffusion Models

Maria-Teresa De Rosa Palmini, Eva Cetinic

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As Text-to-Image (TTI) diffusion models become increasingly influential in content creation, growing attention is being directed toward their societal and cultural implications. While prior research has primarily examined demographic and cultural biases, the ability of these models to accurately represent historical contexts remains largely underexplored. To address this gap, we introduce a benchmark for evaluating how TTI models depict historical contexts. The benchmark combines HistVis, a dataset of 30,000 synthetic images generated by three state-of-the-art diffusion models from carefully designed prompts covering universal human activities across multiple historical periods, with a reproducible evaluation protocol. We evaluate generated imagery across three key aspects: (1) Implicit Stylistic Associations: examining default visual styles associated with specific eras; (2) Historical Consistency: identifying anachronisms such as modern artifacts in pre-modern contexts; and (3) Demographic Representation: comparing generated racial and gender distributions against historically plausible baselines. Our findings reveal systematic inaccuracies in historically themed generated imagery, as TTI models frequently stereotype past eras by incorporating unstated stylistic cues, introduce anachronisms, and fail to reflect plausible demographic patterns. By providing a reproducible benchmark for historical representation in generated imagery, this work provides an initial step toward building more historically accurate TTI models.

2505.14825 2026-02-23 cs.LG math.ST physics.data-an stat.ME stat.ML stat.TH

Assimilative Causal Inference

Marios Andreou, Nan Chen, Erik Bollt

Comments 47 pages (Main Text pp. 1--17; Supplementary Information pp. 18--47), 11 figures (3 in Main Text, 8 in Supplementary Information). Published in Nature Communications. The MATLAB code used in the analyses and to generate the figures in this work can be found in https://github.com/marandmath/ACI_code . For further details visit https://mariosandreou.short.gy/ACI

Journal ref Nature Communications 17, 1854 (2026)

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Causal inference is fundamental across scientific disciplines, yet existing methods struggle to capture instantaneous, time-evolving causal relationships in complex, high-dimensional systems. In this paper, assimilative causal inference (ACI) is developed, which is a methodological framework that leverages Bayesian data assimilation to trace causes backward from observed effects. ACI solves the inverse problem rather than quantifying forward influence. It uniquely identifies dynamic causal interactions without requiring observations of candidate causes, accommodates short datasets, and, in principle, can be implemented in high-dimensional settings by employing efficient data assimilation algorithms. Crucially, it provides online tracking of causal roles that may reverse intermittently and facilitates a mathematically rigorous criterion for the causal influence range, revealing how far effects propagate. The effectiveness of ACI is demonstrated by complex dynamical systems showcasing intermittency and extreme events. ACI opens valuable pathways for studying complex systems, where transient causal structures are critical.

2505.14338 2026-02-23 cs.LG cs.DM cs.NE math.CO

Better Neural Network Expressivity: Subdividing the Simplex

Egor Bakaev, Florestan Brunck, Christoph Hertrich, Jack Stade, Amir Yehudayoff

Comments 12 pages, 2 figures

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英文摘要

This work studies the expressivity of ReLU neural networks with a focus on their depth. A sequence of previous works showed that $\lceil \log_2(n+1) \rceil$ hidden layers are sufficient to compute all continuous piecewise linear (CPWL) functions on $\mathbb{R}^n$. Hertrich, Basu, Di Summa, and Skutella (NeurIPS'21 / SIDMA'23) conjectured that this result is optimal in the sense that there are CPWL functions on $\mathbb{R}^n$, like the maximum function, that require this depth. We disprove the conjecture and show that $\lceil\log_3(n-1)\rceil+1$ hidden layers are sufficient to compute all CPWL functions on $\mathbb{R}^n$. A key step in the proof is that ReLU neural networks with two hidden layers can exactly represent the maximum function of five inputs. More generally, we show that $\lceil\log_3(n-2)\rceil+1$ hidden layers are sufficient to compute the maximum of $n\geq 4$ numbers. Our constructions almost match the $\lceil\log_3(n)\rceil$ lower bound of Averkov, Hojny, and Merkert (ICLR'25) in the special case of ReLU networks with weights that are decimal fractions. The constructions have a geometric interpretation via polyhedral subdivisions of the simplex into ``easier'' polytopes.

2504.17311 2026-02-23 cs.CL cs.AI

FLUKE: A Linguistically-Driven and Task-Agnostic Framework for Robustness Evaluation

Yulia Otmakhova, Hung Thinh Truong, Rahmad Mahendra, Zenan Zhai, Rongxin Zhu, Daniel Beck, Jey Han Lau

Comments Accepted to EACL 2026 Findings

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英文摘要

We present FLUKE (Framework for LingUistically-driven and tasK-agnostic robustness Evaluation), a framework for assessing model robustness through systematic minimal variations of test data. FLUKE introduces controlled variations across linguistic levels -- from orthography to dialect and style -- and leverages large language models (LLMs) with human validation to generate modifications. We demonstrate FLUKE's utility by evaluating both fine-tuned models and LLMs across six diverse NLP tasks (four classification and two generation tasks), and reveal that (1) the impact of linguistic variations is highly task-dependent, with some tests being critical for certain tasks but irrelevant for others; (2) LLMs still exhibit significant brittleness to certain linguistic variations, with reasoning LLMs surprisingly showing less robustness on some tasks compared to base models, and scaling improving robustness only for surface-level modifications; (3) models are overall more brittle to natural, fluent modifications such as syntax or style changes (and especially to negation), compared to corruption-style tests such as letter flipping; (4) the ability of a model to use a linguistic feature in generation does not correlate to its robustness to this feature on downstream tasks. These findings highlight the importance of systematic robustness testing for understanding model behaviors.

2504.14556 2026-02-23 cs.AI cs.ET cs.LG cs.RO

LLM-Enabled In-Context Learning for Data Collection Scheduling in UAV-assisted Sensor Networks

Yousef Emami, Hao Zhou, SeyedSina Nabavirazani, Luis Almeida

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英文摘要

Unmanned Aerial Vehicles (UAVs) are increasingly being utilized in various private and commercial applications, e.g., traffic control, parcel delivery, and Search and Rescue (SAR) missions. Machine Learning (ML) methods used in UAV-Assisted Sensor Networks (UASNETs) and, especially, in Deep Reinforcement Learning (DRL) face challenges such as complex and lengthy model training, gaps between simulation and reality, and low sampling efficiency, which conflict with the urgency of emergencies, such as SAR missions. In this paper, an In-Context Learning (ICL)-Data Collection Scheduling (ICLDC) system is proposed as an alternative to DRL in emergencies. The UAV collects sensory data and transmits it to a Large Language Model (LLM), which creates a task description in natural language. From this description, the UAV receives a data collection schedule that must be executed. A verifier ensures safe UAV operations by evaluating the schedules generated by the LLM and overriding unsafe schedules based on predefined rules. The system continuously adapts by incorporating feedback into the task descriptions and using this for future decisions. This method is tested against jailbreaking attacks, where the task description is manipulated to undermine network performance, highlighting the vulnerability of LLMs to such attacks. The proposed ICLDC significantly reduces cumulative packet loss compared to both the DQN and Maximum Channel Gain baselines. ICLDC presents a promising direction for intelligent scheduling and control in UASNETs.

2504.06629 2026-02-23 cs.CV

Analyzing the Training Dynamics of Image Restoration Transformers: A Revisit to Layer Normalization

MinKyu Lee, Sangeek Hyun, Woojin Jun, Hyunjun Kim, Jiwoo Chung, Jae-Pil Heo

Comments Codes are available at: https://github.com/2minkyulee/i-LN

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英文摘要

This work analyzes the training dynamics of Image Restoration (IR) Transformers and uncovers a critical yet overlooked issue: conventional LayerNorm (LN) drives feature magnitudes to diverge to a million scale and collapses channel-wise entropy. We analyze this in the perspective of networks attempting to bypass LN's constraints that conflict with IR tasks. Accordingly, we address two misalignments between LN and IR: 1) per-token normalization disrupts spatial correlations, and 2) input-independent scaling discards input-specific statistics. To address this, we propose Image Restoration Transformer Tailored Layer Normalization i-LN, a simple drop-in replacement that normalizes features holistically and adaptively rescales them per input. We provide theoretical insights and empirical evidence that this simple design effectively leads to both improved training dynamics and thereby improved performance, validated by extensive experiments.

2502.17160 2026-02-23 cs.CV cs.LG

A Pragmatic Note on Evaluating Generative Models with Fréchet Inception Distance for Retinal Image Synthesis

Yuli Wu, Fucheng Liu, Rüveyda Yilmaz, Henning Konermann, Peter Walter, Johannes Stegmaier

Comments MIDL 2026

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英文摘要

Fréchet Inception Distance (FID), computed with an ImageNet pretrained Inception-v3 network, is widely used as a state-of-the-art evaluation metric for generative models. It assumes that feature vectors from Inception-v3 follow a multivariate Gaussian distribution and calculates the 2-Wasserstein distance based on their means and covariances. While FID effectively measures how closely synthetic data match real data in many image synthesis tasks, the primary goal in biomedical generative models is often to enrich training datasets ideally with corresponding annotations. For this purpose, the gold standard for evaluating generative models is to incorporate synthetic data into downstream task training, such as classification and segmentation, to pragmatically assess its performance. In this paper, we examine cases from retinal imaging modalities, including color fundus photography and optical coherence tomography, where FID and its related metrics misalign with task-specific evaluation goals in classification and segmentation. We highlight the limitations of using various metrics, represented by FID and its variants, as evaluation criteria for these applications and address their potential caveats in broader biomedical imaging modalities and downstream tasks.

2502.16189 2026-02-23 cs.LG cond-mat.mtrl-sci q-bio.BM q-bio.QM

Co-Evolution-Based Metal-Binding Residue Prediction with Graph Neural Networks

Sayedmohammadreza Rastegari, Sina Tabakhi, Xianyuan Liu, Tianyi Jiang, Wei Sang, Haiping Lu

Comments 10 pages, 6 figures

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英文摘要

Understanding protein-metal interactions is central to structural biology, with metal ions being vital for catalysis, stability, and signal transduction. Predicting metal-binding residues and metal types remains challenging due to the structural and evolutionary complexity of proteins. Conventional sequence- and structure-based methods often fail to capture co-evolutionary constraints that reflect how residues evolve together to maintain metal-binding functionality. Recent co-evolution-based methods capture part of this information, but still underutilize the complete co-evolved residue network. To address this limitation, we introduce the Metal-Binding Graph Neural Network (MBGNN), which leverages the complete co-evolved residue network to better capture complex dependencies within protein structures. Experimental results show that MBGNN substantially outperforms the state-of-the-art co-evolution-based method MetalNet2, achieving F1 score improvements of 2.5% for binding residue identification and 3.3% for metal type classification on the MetalNet2 dataset. Its superiority is further demonstrated on both the MetalNet2 and MIonSite datasets, where it outperforms two co-evolution-based and two sequence-based methods, achieving the highest mean F1 scores across both prediction tasks. These findings highlight how integrating co-evolutionary residue networks with graph-based learning advances our ability to decode protein-metal interactions, thereby facilitating functional annotation and rational metalloprotein design. The code and data are released at https://github.com/SRastegari/MBGNN.

2502.03738 2026-02-23 cs.CV

Scaling Laws in Patchification: An Image Is Worth 50,176 Tokens And More

Feng Wang, Yaodong Yu, Guoyizhe Wei, Wei Shao, Yuyin Zhou, Alan Yuille, Cihang Xie

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英文摘要

Since the introduction of Vision Transformer (ViT), patchification has long been regarded as a de facto image tokenization approach for plain visual architectures. By compressing the spatial size of images, this approach can effectively shorten the token sequence and reduce the computational cost of ViT-like plain architectures. In this work, we aim to thoroughly examine the information loss caused by this patchification-based compressive encoding paradigm and how it affects visual understanding. We conduct extensive patch size scaling experiments and excitedly observe an intriguing scaling law in patchification: the models can consistently benefit from decreased patch sizes and attain improved predictive performance, until it reaches the minimum patch size of 1x1, i.e., pixel tokenization. This conclusion is broadly applicable across different vision tasks, various input scales, and diverse architectures such as ViT and the recent Mamba models. Moreover, as a by-product, we discover that with smaller patches, task-specific decoder heads become less critical for dense prediction. In the experiments, we successfully scale up the visual sequence to an exceptional length of 50,176 tokens, achieving a competitive test accuracy of 84.6% with a base-sized model on the ImageNet-1k benchmark. We hope this study can provide insights and theoretical foundations for future works of building non-compressive vision models. Code is available at https://github.com/wangf3014/Patch_Scaling.

2501.04817 2026-02-23 cs.LG cs.AI

Decentralised Resource Sharing in TinyML: Wireless Bilayer Gossip Parallel SGD for Collaborative Learning

Ziyuan Bao, Eiman Kanjo, Soumya Banerjee, Hasib-Al Rashid, Tinoosh Mohsenin

Journal ref IEEE Pervasive Computing, 2026

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英文摘要

With the growing computational capabilities of microcontroller units (MCUs), edge devices can now support machine learning models. However, deploying decentralised federated learning (DFL) on such devices presents key challenges, including intermittent connectivity, limited communication range, and dynamic network topologies. This paper proposes a novel framework, bilayer Gossip Decentralised Parallel Stochastic Gradient Descent (GD PSGD), designed to address these issues in resource-constrained environments. The framework incorporates a hierarchical communication structure using Distributed Kmeans (DKmeans) clustering for geographic grouping and a gossip protocol for efficient model aggregation across two layers: intra-cluster and inter-cluster. We evaluate the framework's performance against the Centralised Federated Learning (CFL) baseline using the MCUNet model on the CIFAR-10 dataset under IID and Non-IID conditions. Results demonstrate that the proposed method achieves comparable accuracy to CFL on IID datasets, requiring only 1.8 additional rounds for convergence. On Non-IID datasets, the accuracy loss remains under 8\% for moderate data imbalance. These findings highlight the framework's potential to support scalable and privacy-preserving learning on edge devices with minimal performance trade-offs.

2412.13897 2026-02-23 cs.LG cs.CV

Data-Efficient Inference of Neural Fluid Fields via SciML Foundation Model

Yuqiu Liu, Jingxuan Xu, Mauricio Soroco, Yunchao Wei, Wuyang Chen

Comments Accepted by 3DV 2026

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英文摘要

Recent developments in 3D vision have enabled significant progress in inferring neural fluid fields and realistic rendering of fluid dynamics. However, these methods require dense captures of real-world flows, which demand specialized laboratory setups, making the process costly and challenging. Scientific machine learning (SciML) foundation models, pretrained on extensive simulations of partial differential equations (PDEs), encode rich multiphysics knowledge and thus provide promising sources of domain priors for fluid field inference. Nevertheless, the transferability of these foundation models to real-world vision problems remains largely underexplored. In this work, we demonstrate that SciML foundation models can significantly reduce the data requirements for inferring real-world 3D fluid dynamics while improving generalization. Our method leverages the strong forecasting capabilities and meaningful representations learned by SciML foundation models. We introduce a novel collaborative training strategy that equips neural fluid fields with augmented frames and fluid features extracted from the foundation model. Extensive experiments show substantial improvements in both quantitative metrics and visual quality over prior approaches. In particular, our method achieves a 9-36% improvement in peak signal-to-noise ratio (PSNR) for future prediction while reducing the number of required training frames by 25-50%. These results highlight the practical applicability of SciML foundation models for real-world fluid dynamics reconstruction. Our code is available at: https://github.com/delta-lab-ai/SciML-HY.